Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z9C entry

There is 1 chain in PDB entry 2Z9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ALA 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2Z9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 14Right-handed 310
Helix 2
2
A
15 32Right-handed alpha
Helix 3
3
A
53 58Right-handed alpha
Helix 4
4
A
66 86Right-handed alpha
Helix 5
5
A
101 112Right-handed alpha
Helix 6
6
A
151 164Right-handed alpha
Helix 7
7
A
175 178Right-handed 310
Helix 8
8
A
179 200Right-handed alpha
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There are 2 sheets in PDB entry 2Z9C. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
2 7parallel
Strand 3
A
88 92parallel
Strand 4
A
133 139parallel
Strand 5
A
168 173parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 121first strand
Strand 2
A
124 127anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il