Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZVO entry

There are 4 chains in PDB entry 2ZVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ARG 148
G
 MET 1VAL 146
B
 GLY 250LYS 337
D
 GLY 250LYS 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2ZVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 35Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
56 60Right-handed 310
Helix 4
4
A
99 111Right-handed alpha
Helix 5
5
A
113 115Right-handed 310
Helix 6
6
A
132 136Right-handed 310
Helix 7
7
G
22 35Right-handed alpha
Helix 8
8
G
37 39Right-handed 310
Helix 9
9
G
98 111Right-handed alpha
Helix 10
10
G
113 117Right-handed 310
Helix 11
11
B
253 289Right-handed alpha
Helix 12
12
B
290 337Right-handed alpha
Helix 13
13
D
251 289Right-handed alpha
Helix 14
14
D
289 325Right-handed alpha
Helix 15
15
D
326 336Right-handed alpha
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There are 4 sheets in PDB entry 2ZVO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 16first strand
Strand 2
A
2 6anti-parallel
Strand 3
A
66 71parallel
Strand 4
A
41 45anti-parallel
Strand 5
A
48 49anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 93first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
142 147parallel
Strand 4
A
117 121anti-parallel
Strand 5
A
124 125anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
12 16first strand
Strand 2
G
2 7anti-parallel
Strand 3
G
66 71parallel
Strand 4
G
41 45anti-parallel
Strand 5
G
48 49anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
88 93first strand
Strand 2
G
77 82anti-parallel
Strand 3
G
142 146parallel
Strand 4
G
118 120anti-parallel
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