Analysis of interatomic Contacts of Structural Units in PDB entry:
3AZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AZI entry

There are 10 chains in PDB entry 3AZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 38ALA 135
B
ASN 25GLY 102
C
ARG 11LYS 118
D
LYS 30ALA 124
E
LYS 37ALA 135
F
ARG 19GLY 102
G
LYS 15LYS 118
H
SER 32ALA 124
I
A 1 A 145
J
T 148 T 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3AZI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
44 57Right-handed alpha
Helix 2
2
A
63 77Right-handed alpha
Helix 3
3
A
87 114Right-handed alpha
Helix 4
4
A
120 131Right-handed alpha
Helix 5
5
B
25 29Right-handed 310
Helix 6
6
B
30 41Right-handed alpha
Helix 7
7
B
49 76Right-handed alpha
Helix 8
8
B
82 94Right-handed alpha
Helix 9
9
C
16 21Right-handed alpha
Helix 10
10
C
26 37Right-handed alpha
Helix 11
11
C
46 73Right-handed alpha
Helix 12
12
C
79 90Right-handed alpha
Helix 13
13
C
90 97Right-handed alpha
Helix 14
14
C
112 116Right-handed 310
Helix 15
15
D
37 49Right-handed alpha
Helix 16
16
D
55 84Right-handed alpha
Helix 17
17
D
90 102Right-handed alpha
Helix 18
18
D
103 123Right-handed alpha
Helix 19
19
E
44 57Right-handed alpha
Helix 20
20
E
63 77Right-handed alpha
Helix 21
21
E
85 114Right-handed alpha
Helix 22
22
E
120 131Right-handed alpha
Helix 23
23
F
24 29Right-handed 310
Helix 24
24
F
30 41Right-handed alpha
Helix 25
25
F
49 76Right-handed alpha
Helix 26
26
F
82 93Right-handed alpha
Helix 27
27
G
16 22Right-handed alpha
Helix 28
28
G
26 36Right-handed alpha
Helix 29
29
G
45 73Right-handed alpha
Helix 30
30
G
79 89Right-handed alpha
Helix 31
31
G
90 97Right-handed alpha
Helix 32
32
G
112 116Right-handed 310
Helix 33
33
H
37 49Right-handed alpha
Helix 34
34
H
55 84Right-handed alpha
Helix 35
35
H
90 102Right-handed alpha
Helix 36
36
H
103 124Right-handed alpha
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There are 10 sheets in PDB entry 3AZI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 119first strand
Strand 2
B
45 46parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 98first strand
Strand 2
G
101 102parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
42 43first strand
Strand 2
D
88 89parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
77 78first strand
Strand 2
D
53 54parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 102first strand
Strand 2
F
96 98parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
42 43first strand
Strand 2
H
88 89parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
77 78first strand
Strand 2
H
53 54parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il