Analysis of interatomic Contacts of Structural Units in PDB entry:
3B89


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B89 entry

There is 1 chain in PDB entry 3B89 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 2ASN 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3B89. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
20 34Right-handed alpha
Helix 3
3
A
41 51Right-handed alpha
Helix 4
4
A
58 71Right-handed alpha
Helix 5
5
A
73 80Right-handed alpha
Helix 6
6
A
81 87Right-handed alpha
Helix 7
7
A
90 100Right-handed alpha
Helix 8
8
A
115 121Right-handed alpha
Helix 9
9
A
133 146Right-handed alpha
Helix 10
10
A
175 183Right-handed alpha
Helix 11
11
A
185 193Right-handed alpha
Helix 12
12
A
218 227Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3B89.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
150 155first strand
Strand 2
A
126 131parallel
Strand 3
A
106 110parallel
Strand 4
A
169 172parallel
Strand 5
A
198 204parallel
Strand 6
A
242 249anti-parallel
Strand 7
A
231 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il