Analysis of interatomic Contacts of Structural Units in PDB entry:
3B8I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B8I entry

There are 6 chains in PDB entry 3B8I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3LYS 286
B
 ARG 3VAL 285
C
 ARG 3GLU 284
D
 ARG 3GLU 284
E
 ALA 4LYS 286
F
 ARG 3LYS 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 3B8I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 19Right-handed alpha
Helix 2
2
A
30 40Right-handed alpha
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
66 79Right-handed alpha
Helix 5
5
A
95 110Right-handed alpha
Helix 6
6
A
134 149Right-handed alpha
Helix 7
7
A
166 180Right-handed alpha
Helix 8
8
A
192 201Right-handed alpha
Helix 9
9
A
214 218Right-handed 310
Helix 10
10
A
219 226Right-handed alpha
Helix 11
11
A
235 254Right-handed alpha
Helix 12
12
A
261 269Right-handed alpha
Helix 13
13
A
271 284Right-handed alpha
Helix 14
14
B
5 18Right-handed alpha
Helix 15
15
B
30 40Right-handed alpha
Helix 16
16
B
48 58Right-handed alpha
Helix 17
17
B
66 79Right-handed alpha
Helix 18
18
B
95 110Right-handed alpha
Helix 19
19
B
134 149Right-handed alpha
Helix 20
20
B
166 181Right-handed alpha
Helix 21
21
B
192 201Right-handed alpha
Helix 22
22
B
214 218Right-handed 310
Helix 23
23
B
219 226Right-handed alpha
Helix 24
24
B
235 254Right-handed alpha
Helix 25
25
B
261 269Right-handed alpha
Helix 26
26
B
271 283Right-handed alpha
Helix 27
27
C
5 19Right-handed alpha
Helix 28
28
C
30 40Right-handed alpha
Helix 29
29
C
48 58Right-handed alpha
Helix 30
30
C
66 79Right-handed alpha
Helix 31
31
C
95 110Right-handed alpha
Helix 32
32
C
134 149Right-handed alpha
Helix 33
33
C
166 181Right-handed alpha
Helix 34
34
C
192 201Right-handed alpha
Helix 35
35
C
219 226Right-handed alpha
Helix 36
36
C
235 254Right-handed alpha
Helix 37
37
C
261 269Right-handed alpha
Helix 38
38
C
271 284Right-handed alpha
Helix 39
39
D
5 19Right-handed alpha
Helix 40
40
D
30 40Right-handed alpha
Helix 41
41
D
48 58Right-handed alpha
Helix 42
42
D
66 79Right-handed alpha
Helix 43
43
D
95 110Right-handed alpha
Helix 44
44
D
134 149Right-handed alpha
Helix 45
45
D
166 180Right-handed alpha
Helix 46
46
D
192 201Right-handed alpha
Helix 47
47
D
214 218Right-handed 310
Helix 48
48
D
219 226Right-handed alpha
Helix 49
49
D
235 254Right-handed alpha
Helix 50
50
D
261 269Right-handed alpha
Helix 51
51
D
271 283Right-handed alpha
Helix 52
52
E
5 19Right-handed alpha
Helix 53
53
E
30 40Right-handed alpha
Helix 54
54
E
48 58Right-handed alpha
Helix 55
55
E
66 79Right-handed alpha
Helix 56
56
E
95 110Right-handed alpha
Helix 57
57
E
134 149Right-handed alpha
Helix 58
58
E
166 180Right-handed alpha
Helix 59
59
E
192 201Right-handed alpha
Helix 60
60
E
219 226Right-handed alpha
Helix 61
61
E
235 254Right-handed alpha
Helix 62
62
E
261 269Right-handed alpha
Helix 63
63
E
271 283Right-handed alpha
Helix 64
64
F
5 19Right-handed alpha
Helix 65
65
F
30 41Right-handed alpha
Helix 66
66
F
48 58Right-handed alpha
Helix 67
67
F
66 79Right-handed alpha
Helix 68
68
F
95 110Right-handed alpha
Helix 69
69
F
134 149Right-handed alpha
Helix 70
70
F
166 181Right-handed alpha
Helix 71
71
F
192 201Right-handed alpha
Helix 72
72
F
214 218Right-handed 310
Helix 73
73
F
219 226Right-handed alpha
Helix 74
74
F
235 254Right-handed alpha
Helix 75
75
F
261 269Right-handed alpha
Helix 76
76
F
271 284Right-handed alpha
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There are 6 sheets in PDB entry 3B8I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
228 232parallel
Strand 3
A
207 210parallel
Strand 4
A
184 188parallel
Strand 5
A
155 161parallel
Strand 6
A
113 117parallel
Strand 7
A
85 88parallel
Strand 8
A
45 47parallel
Strand 9
A
26 27parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
228 232parallel
Strand 3
B
207 210parallel
Strand 4
B
184 188parallel
Strand 5
B
155 161parallel
Strand 6
B
113 117parallel
Strand 7
B
85 88parallel
Strand 8
B
45 47parallel
Strand 9
B
26 27parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 24first strand
Strand 2
C
228 232parallel
Strand 3
C
207 210parallel
Strand 4
C
184 188parallel
Strand 5
C
155 161parallel
Strand 6
C
113 117parallel
Strand 7
C
85 88parallel
Strand 8
C
45 47parallel
Strand 9
C
26 27parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 24first strand
Strand 2
D
228 232parallel
Strand 3
D
207 210parallel
Strand 4
D
184 188parallel
Strand 5
D
155 161parallel
Strand 6
D
113 117parallel
Strand 7
D
85 88parallel
Strand 8
D
45 47parallel
Strand 9
D
26 27parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
23 24first strand
Strand 2
E
228 232parallel
Strand 3
E
207 210parallel
Strand 4
E
184 188parallel
Strand 5
E
155 161parallel
Strand 6
E
113 117parallel
Strand 7
E
85 88parallel
Strand 8
E
45 47parallel
Strand 9
E
26 27parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
23 24first strand
Strand 2
F
228 232parallel
Strand 3
F
207 210parallel
Strand 4
F
184 188parallel
Strand 5
F
155 161parallel
Strand 6
F
113 117parallel
Strand 7
F
85 88parallel
Strand 8
F
45 47parallel
Strand 9
F
26 27parallel
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