Analysis of interatomic Contacts of Structural Units in PDB entry:
3BUN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BUN entry

There are 3 chains in PDB entry 3BUN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 51ASP 52
A
ILE 54PRO 57
B
PRO 48GLY 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3BUN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
52 71Right-handed alpha
Helix 2
2
B
72 76Right-handed 310
Helix 3
3
B
83 102Right-handed alpha
Helix 4
4
B
105 112Right-handed alpha
Helix 5
5
B
112 137Right-handed alpha
Helix 6
6
B
138 142Right-handed 310
Helix 7
7
B
145 169Right-handed alpha
Helix 8
8
B
170 173Right-handed 310
Helix 9
9
B
175 179Right-handed 310
Helix 10
10
B
183 195Right-handed alpha
Helix 11
11
B
202 213Right-handed alpha
Helix 12
12
B
217 229Right-handed alpha
Helix 13
13
B
238 248Right-handed alpha
Helix 14
14
B
250 252Right-handed 310
Helix 15
15
B
253 262Right-handed alpha
Helix 16
16
B
273 283Right-handed alpha
Helix 17
17
B
323 334Right-handed alpha
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There are 2 sheets in PDB entry 3BUN. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
199 201first strand
Strand 2
B
235 237anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
314 317first strand
Strand 2
B
303 308anti-parallel
Strand 3
B
290 295anti-parallel
Strand 4
B
339 340parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il