Analysis of interatomic Contacts of Structural Units in PDB entry:
3CZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CZE entry

There is 1 chain in PDB entry 3CZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6ARG 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3CZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 17Right-handed alpha
Helix 2
2
A
24 47Right-handed alpha
Helix 3
3
A
51 69Right-handed alpha
Helix 4
4
A
71 81Right-handed alpha
Helix 5
5
A
84 88Right-handed 310
Helix 6
6
A
97 103Right-handed alpha
Helix 7
7
A
104 111Right-handed alpha
Helix 8
8
A
111 119Right-handed alpha
Helix 9
9
A
136 140Right-handed 310
Helix 10
10
A
154 167Right-handed alpha
Helix 11
11
A
185 193Right-handed alpha
Helix 12
12
A
195 200Right-handed alpha
Helix 13
13
A
208 216Right-handed alpha
Helix 14
14
A
255 272Right-handed alpha
Helix 15
15
A
281 285Right-handed 310
Helix 16
16
A
296 314Right-handed alpha
Helix 17
17
A
326 335Right-handed 310
Helix 18
18
A
336 340Right-handed 310
Helix 19
19
A
349 363Right-handed alpha
Helix 20
20
A
365 374Right-handed alpha
Helix 21
21
A
395 398Right-handed 310
Helix 22
22
A
399 404Right-handed alpha
Helix 23
23
A
413 422Right-handed alpha
Helix 24
24
A
448 453Right-handed alpha
Helix 25
25
A
454 462Right-handed alpha
Helix 26
26
A
463 483Right-handed alpha
Helix 27
27
A
493 497Right-handed 310
Helix 28
28
A
501 507Right-handed 310
Helix 29
29
A
513 519Right-handed 310
Helix 30
30
A
523 529Right-handed alpha
Helix 31
31
A
530 532Right-handed 310
Helix 32
32
A
535 554Right-handed alpha
Helix 33
33
A
555 558Right-handed 310
Helix 34
34
A
596 600Right-handed 310
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There are 7 sheets in PDB entry 3CZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 96first strand
Strand 2
A
122 125parallel
Strand 3
A
171 177parallel
Strand 4
A
274 280parallel
Strand 5
A
318 321parallel
Strand 6
A
346 348parallel
Strand 7
A
383 387parallel
Strand 8
A
486 491parallel
Strand 9
A
93 96parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 131first strand
Strand 2
A
142 148anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 182first strand
Strand 2
A
248 250anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
238 241anti-parallel
Strand 3
A
230 233anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 434first strand
Strand 2
A
445 446anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 566first strand
Strand 2
A
573 578anti-parallel
Strand 3
A
582 587anti-parallel
Strand 4
A
632 636anti-parallel
Strand 5
A
605 606anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 595first strand
Strand 2
A
625 627anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il