Analysis of interatomic Contacts of Structural Units in PDB entry:
3DTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DTC entry

There is 1 chain in PDB entry 3DTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 136THR 405
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3DTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
184 198Right-handed alpha
Helix 2
2
A
228 233Right-handed alpha
Helix 3
3
A
238 259Right-handed alpha
Helix 4
4
A
270 272Right-handed 310
Helix 5
5
A
312 316Right-handed 310
Helix 6
6
A
317 324Right-handed alpha
Helix 7
7
A
327 345Right-handed alpha
Helix 8
8
A
353 363Right-handed alpha
Helix 9
9
A
375 386Right-handed alpha
Helix 10
10
A
389 393Right-handed 310
Helix 11
11
A
395 405Right-handed alpha
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There are 2 sheets in PDB entry 3DTC. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 153first strand
Strand 2
A
156 163anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
217 221anti-parallel
Strand 5
A
206 210anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
274 276anti-parallel
Strand 3
A
290 292anti-parallel
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