Analysis of interatomic Contacts of Structural Units in PDB entry:
3DV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DV0 entry

There are 10 chains in PDB entry 3DV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4SER 367
B
 ALA 1PHE 324
C
 THR 4LYS 368
D
 ALA 1PHE 324
E
 THR 4SER 367
F
 ALA 1PHE 324
G
 THR 4SER 367
H
 ALA 1PHE 324
I
 ARG 127GLY 169
J
 VAL 129GLY 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are138 helices in PDB entry 3DV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 19Right-handed alpha
Helix 2
2
A
42 69Right-handed alpha
Helix 3
3
A
81 91Right-handed alpha
Helix 4
4
A
104 111Right-handed alpha
Helix 5
5
A
114 124Right-handed alpha
Helix 6
6
A
125 130Right-handed 310
Helix 7
7
A
145 162Right-handed alpha
Helix 8
8
A
174 177Right-handed 310
Helix 9
9
A
178 191Right-handed alpha
Helix 10
10
A
211 213Right-handed 310
Helix 11
11
A
219 226Right-handed 310
Helix 12
12
A
237 254Right-handed alpha
Helix 13
13
A
294 306Right-handed alpha
Helix 14
14
A
310 334Right-handed alpha
Helix 15
15
A
339 346Right-handed alpha
Helix 16
16
A
352 366Right-handed alpha
Helix 17
17
B
5 20Right-handed alpha
Helix 18
18
B
42 48Right-handed alpha
Helix 19
19
B
58 72Right-handed alpha
Helix 20
20
B
82 88Right-handed 310
Helix 21
21
B
89 95Right-handed alpha
Helix 22
22
B
96 98Right-handed 310
Helix 23
23
B
99 104Right-handed alpha
Helix 24
24
B
132 137Right-handed alpha
Helix 25
25
B
149 163Right-handed alpha
Helix 26
26
B
174 176Right-handed 310
Helix 27
27
B
210 226Right-handed alpha
Helix 28
28
B
242 254Right-handed alpha
Helix 29
29
B
268 280Right-handed alpha
Helix 30
30
B
281 284Right-handed 310
Helix 31
31
B
300 302Right-handed 310
Helix 32
32
B
303 308Right-handed alpha
Helix 33
33
B
310 323Right-handed alpha
Helix 34
34
C
8 19Right-handed alpha
Helix 35
35
C
34 38Right-handed 310
Helix 36
36
C
42 69Right-handed alpha
Helix 37
37
C
81 90Right-handed alpha
Helix 38
38
C
104 111Right-handed alpha
Helix 39
39
C
114 124Right-handed alpha
Helix 40
40
C
125 130Right-handed 310
Helix 41
41
C
145 161Right-handed alpha
Helix 42
42
C
174 177Right-handed 310
Helix 43
43
C
178 191Right-handed alpha
Helix 44
44
C
210 214Right-handed alpha
Helix 45
45
C
219 226Right-handed 310
Helix 46
46
C
237 254Right-handed alpha
Helix 47
47
C
289 293Right-handed 310
Helix 48
48
C
294 305Right-handed alpha
Helix 49
49
C
310 334Right-handed alpha
Helix 50
50
C
339 346Right-handed alpha
Helix 51
51
C
352 366Right-handed alpha
Helix 52
52
D
4 20Right-handed alpha
Helix 53
53
D
42 48Right-handed alpha
Helix 54
54
D
58 72Right-handed alpha
Helix 55
55
D
82 88Right-handed 310
Helix 56
56
D
89 95Right-handed alpha
Helix 57
57
D
96 98Right-handed 310
Helix 58
58
D
99 104Right-handed alpha
Helix 59
59
D
132 137Right-handed alpha
Helix 60
60
D
149 163Right-handed alpha
Helix 61
61
D
174 176Right-handed 310
Helix 62
62
D
211 225Right-handed alpha
Helix 63
63
D
242 254Right-handed alpha
Helix 64
64
D
268 281Right-handed alpha
Helix 65
65
D
282 284Right-handed 310
Helix 66
66
D
300 302Right-handed 310
Helix 67
67
D
303 308Right-handed alpha
Helix 68
68
D
310 323Right-handed alpha
Helix 69
69
E
8 19Right-handed alpha
Helix 70
70
E
34 38Right-handed 310
Helix 71
71
E
42 69Right-handed alpha
Helix 72
72
E
81 91Right-handed alpha
Helix 73
73
E
104 110Right-handed alpha
Helix 74
74
E
114 124Right-handed alpha
Helix 75
75
E
125 130Right-handed 310
Helix 76
76
E
145 161Right-handed alpha
Helix 77
77
E
174 177Right-handed 310
Helix 78
78
E
178 191Right-handed alpha
Helix 79
79
E
211 213Right-handed 310
Helix 80
80
E
219 225Right-handed 310
Helix 81
81
E
237 254Right-handed alpha
Helix 82
82
E
294 306Right-handed alpha
Helix 83
83
E
310 334Right-handed alpha
Helix 84
84
E
339 346Right-handed alpha
Helix 85
85
E
352 366Right-handed alpha
Helix 86
86
F
4 20Right-handed alpha
Helix 87
87
F
42 48Right-handed alpha
Helix 88
88
F
58 71Right-handed alpha
Helix 89
89
F
82 88Right-handed 310
Helix 90
90
F
89 95Right-handed alpha
Helix 91
91
F
99 104Right-handed alpha
Helix 92
92
F
132 137Right-handed alpha
Helix 93
93
F
149 163Right-handed alpha
Helix 94
94
F
174 176Right-handed 310
Helix 95
95
F
210 225Right-handed alpha
Helix 96
96
F
242 254Right-handed alpha
Helix 97
97
F
268 281Right-handed alpha
Helix 98
98
F
282 284Right-handed 310
Helix 99
99
F
300 302Right-handed 310
Helix 100
100
F
303 308Right-handed alpha
Helix 101
101
F
310 323Right-handed alpha
Helix 102
102
G
8 18Right-handed alpha
Helix 103
103
G
34 38Right-handed 310
Helix 104
104
G
42 69Right-handed alpha
Helix 105
105
G
81 91Right-handed alpha
Helix 106
106
G
104 110Right-handed alpha
Helix 107
107
G
114 124Right-handed alpha
Helix 108
108
G
125 130Right-handed 310
Helix 109
109
G
145 162Right-handed alpha
Helix 110
110
G
174 177Right-handed 310
Helix 111
111
G
178 191Right-handed alpha
Helix 112
112
G
210 214Right-handed alpha
Helix 113
113
G
219 221Right-handed 310
Helix 114
114
G
222 227Right-handed alpha
Helix 115
115
G
237 254Right-handed alpha
Helix 116
116
G
294 305Right-handed alpha
Helix 117
117
G
310 334Right-handed alpha
Helix 118
118
G
339 346Right-handed alpha
Helix 119
119
G
352 366Right-handed alpha
Helix 120
120
H
4 20Right-handed alpha
Helix 121
121
H
42 48Right-handed alpha
Helix 122
122
H
58 71Right-handed alpha
Helix 123
123
H
82 88Right-handed 310
Helix 124
124
H
89 95Right-handed alpha
Helix 125
125
H
96 104Right-handed alpha
Helix 126
126
H
132 138Right-handed alpha
Helix 127
127
H
149 163Right-handed alpha
Helix 128
128
H
174 176Right-handed 310
Helix 129
129
H
211 225Right-handed alpha
Helix 130
130
H
242 254Right-handed alpha
Helix 131
131
H
268 281Right-handed alpha
Helix 132
132
H
282 284Right-handed 310
Helix 133
133
H
300 304Right-handed 310
Helix 134
134
H
310 323Right-handed alpha
Helix 135
135
I
132 142Right-handed alpha
Helix 136
136
I
145 149Right-handed 310
Helix 137
137
I
153 157Right-handed 310
Helix 138
138
I
163 169Right-handed alpha
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There are 24 sheets in PDB entry 3DV0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
230 234parallel
Strand 3
A
259 264parallel
Strand 4
A
195 201parallel
Strand 5
A
167 172parallel
Strand 6
A
97 99parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
208 209anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
180 182anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
23 27parallel
Strand 3
B
75 78parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 118first strand
Strand 2
B
167 172parallel
Strand 3
B
143 145parallel
Strand 4
B
237 239anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 199first strand
Strand 2
B
230 234anti-parallel
Strand 3
B
204 208parallel
Strand 4
B
256 263parallel
Strand 5
B
289 293parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 23first strand
Strand 2
C
230 234parallel
Strand 3
C
259 264parallel
Strand 4
C
195 201parallel
Strand 5
C
167 172parallel
Strand 6
C
97 99parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 205first strand
Strand 2
C
208 209anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 3first strand
Strand 2
D
181 182anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 54first strand
Strand 2
D
23 27parallel
Strand 3
D
75 78parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 118first strand
Strand 2
D
167 172parallel
Strand 3
D
143 145parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
196 199first strand
Strand 2
D
230 234anti-parallel
Strand 3
D
204 208parallel
Strand 4
D
256 263parallel
Strand 5
D
289 293parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 23first strand
Strand 2
E
230 234parallel
Strand 3
E
259 264parallel
Strand 4
E
195 201parallel
Strand 5
E
167 172parallel
Strand 6
E
97 99parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
204 205first strand
Strand 2
E
208 209anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 3first strand
Strand 2
F
181 182anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
52 54first strand
Strand 2
F
23 27parallel
Strand 3
F
75 78parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
113 118first strand
Strand 2
F
167 172parallel
Strand 3
F
144 145parallel
Strand 4
F
237 239anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
196 199first strand
Strand 2
F
230 234anti-parallel
Strand 3
F
204 208parallel
Strand 4
F
256 263parallel
Strand 5
F
289 293parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
97 99first strand
Strand 2
G
167 172parallel
Strand 3
G
195 201parallel
Strand 4
G
259 264parallel
Strand 5
G
230 234parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
204 205first strand
Strand 2
G
208 209anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 3first strand
Strand 2
H
181 182anti-parallel
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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
52 54first strand
Strand 2
H
23 27parallel
Strand 3
H
75 79parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
113 118first strand
Strand 2
H
167 172parallel
Strand 3
H
143 145parallel
Strand 4
H
237 239anti-parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
196 199first strand
Strand 2
H
230 234anti-parallel
Strand 3
H
204 208parallel
Strand 4
H
256 263parallel
Strand 5
H
289 293parallel
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