Analysis of interatomic Contacts of Structural Units in PDB entry:
3E6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E6Y entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 3E6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5THR 238
B
 ALA 4ASP 240
C
 GLN 1TYR 3
C
 VAL 5VAL 5
D
 GLN 1TYR 3
D
 VAL 5VAL 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3E6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 21Right-handed alpha
Helix 2
2
A
23 37Right-handed alpha
Helix 3
3
A
44 79Right-handed alpha
Helix 4
4
A
81 113Right-handed alpha
Helix 5
5
A
113 118Right-handed alpha
Helix 6
6
A
120 140Right-handed alpha
Helix 7
7
A
143 169Right-handed alpha
Helix 8
8
A
173 190Right-handed alpha
Helix 9
9
A
193 210Right-handed alpha
Helix 10
10
A
211 215Right-handed 310
Helix 11
11
A
219 238Right-handed alpha
Helix 12
12
B
6 22Right-handed alpha
Helix 13
13
B
23 36Right-handed alpha
Helix 14
14
B
44 79Right-handed alpha
Helix 15
15
B
81 113Right-handed alpha
Helix 16
16
B
120 140Right-handed alpha
Helix 17
17
B
143 169Right-handed alpha
Helix 18
18
B
173 190Right-handed alpha
Helix 19
19
B
193 209Right-handed alpha
Helix 20
20
B
219 240Right-handed alpha
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There are no sheets in PDB entry 3E6Y
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