Analysis of interatomic Contacts of Structural Units in PDB entry:
3E82

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3E82 entry

There are 4 chains in PDB entry 3E82 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 15	HIS 368
B	LEU 11	HIS 368
D	THR 15	HIS 368
E	ASN 13	HIS 368

There are 53 helices in PDB entry 3E82. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	24	30	Right-handed alpha
Helix 2	2	A	30	37	Right-handed alpha
Helix 3	3	A	50	58	Right-handed alpha
Helix 4	4	A	66	72	Right-handed alpha
Helix 5	5	A	84	86	Right-handed 310
Helix 6	6	A	87	98	Right-handed alpha
Helix 7	7	A	111	125	Right-handed alpha
Helix 8	8	A	138	151	Right-handed alpha
Helix 9	9	A	183	201	Right-handed alpha
Helix 10	10	A	265	273	Right-handed alpha
Helix 11	11	A	307	319	Right-handed alpha
Helix 12	12	A	327	348	Right-handed alpha
Helix 13	13	A	356	367	Right-handed alpha
Helix 14	14	B	24	30	Right-handed alpha
Helix 15	15	B	30	37	Right-handed alpha
Helix 16	16	B	50	58	Right-handed alpha
Helix 17	17	B	66	73	Right-handed alpha
Helix 18	18	B	84	86	Right-handed 310
Helix 19	19	B	87	98	Right-handed alpha
Helix 20	20	B	111	125	Right-handed alpha
Helix 21	21	B	138	151	Right-handed alpha
Helix 22	22	B	183	201	Right-handed alpha
Helix 23	23	B	265	272	Right-handed alpha
Helix 24	24	B	307	319	Right-handed alpha
Helix 25	25	B	327	348	Right-handed alpha
Helix 26	26	B	356	365	Right-handed alpha
Helix 27	27	D	24	30	Right-handed alpha
Helix 28	28	D	30	37	Right-handed alpha
Helix 29	29	D	50	58	Right-handed alpha
Helix 30	30	D	66	72	Right-handed alpha
Helix 31	31	D	84	86	Right-handed 310
Helix 32	32	D	87	97	Right-handed alpha
Helix 33	33	D	111	125	Right-handed alpha
Helix 34	34	D	138	150	Right-handed alpha
Helix 35	35	D	183	201	Right-handed alpha
Helix 36	36	D	265	272	Right-handed alpha
Helix 37	37	D	307	319	Right-handed alpha
Helix 38	38	D	327	348	Right-handed alpha
Helix 39	39	D	356	367	Right-handed alpha
Helix 40	40	E	24	30	Right-handed alpha
Helix 41	41	E	30	37	Right-handed alpha
Helix 42	42	E	50	56	Right-handed alpha
Helix 43	43	E	66	72	Right-handed alpha
Helix 44	44	E	84	86	Right-handed 310
Helix 45	45	E	87	98	Right-handed alpha
Helix 46	46	E	111	125	Right-handed alpha
Helix 47	47	E	133	137	Right-handed 310
Helix 48	48	E	138	150	Right-handed alpha
Helix 49	49	E	183	201	Right-handed alpha
Helix 50	50	E	265	273	Right-handed alpha
Helix 51	51	E	307	319	Right-handed alpha
Helix 52	52	E	327	348	Right-handed alpha
Helix 53	53	E	356	368	Right-handed alpha

There are 8 sheets in PDB entry 3E82. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	41	47	parallel
Strand 3	A	16	21	parallel
Strand 4	A	78	81	parallel
Strand 5	A	101	104	parallel
Strand 6	A	129	131	parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	205	211	first strand
Strand 2	A	222	228	anti-parallel
Strand 3	A	233	239	anti-parallel
Strand 4	A	156	164	parallel
Strand 5	A	249	253	anti-parallel
Strand 6	A	256	260	anti-parallel
Strand 7	A	288	292	anti-parallel
Strand 8	A	297	300	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	41	47	parallel
Strand 3	B	16	21	parallel
Strand 4	B	78	81	parallel
Strand 5	B	101	104	parallel
Strand 6	B	129	131	parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	211	first strand
Strand 2	B	222	228	anti-parallel
Strand 3	B	233	239	anti-parallel
Strand 4	B	156	164	parallel
Strand 5	B	249	253	anti-parallel
Strand 6	B	256	260	anti-parallel
Strand 7	B	288	292	anti-parallel
Strand 8	B	297	300	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	47	first strand
Strand 2	D	16	21	parallel
Strand 3	D	78	81	parallel
Strand 4	D	101	104	parallel
Strand 5	D	129	131	parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	205	211	first strand
Strand 2	D	222	229	anti-parallel
Strand 3	D	232	239	anti-parallel
Strand 4	D	156	164	parallel
Strand 5	D	249	253	anti-parallel
Strand 6	D	257	260	anti-parallel
Strand 7	D	288	291	anti-parallel
Strand 8	D	297	300	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	64	first strand
Strand 2	E	41	47	parallel
Strand 3	E	16	21	parallel
Strand 4	E	78	81	parallel
Strand 5	E	101	104	parallel
Strand 6	E	129	131	parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	205	211	first strand
Strand 2	E	222	228	anti-parallel
Strand 3	E	233	239	anti-parallel
Strand 4	E	156	164	parallel
Strand 5	E	249	253	anti-parallel
Strand 6	E	257	260	anti-parallel
Strand 7	E	288	291	anti-parallel
Strand 8	E	297	300	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3E82

Analysis of interatomic Contacts of Structural Units in PDB entry:
3E82