Analysis of interatomic Contacts of Structural Units in PDB entry:
3FKI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3FKI entry

There is 1 chain in PDB entry 3FKI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	PRO 1294

There are128 helices in PDB entry 3FKI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	31	Right-handed alpha
Helix 2	2	A	95	104	Right-handed alpha
Helix 3	3	A	121	127	Right-handed alpha
Helix 4	4	A	131	136	Right-handed alpha
Helix 5	5	A	138	142	Right-handed 310
Helix 6	6	A	203	212	Right-handed alpha
Helix 7	7	A	215	222	Right-handed alpha
Helix 8	8	A	230	233	Right-handed 310
Helix 9	9	A	260	281	Right-handed alpha
Helix 10	10	A	289	305	Right-handed alpha
Helix 11	11	A	367	374	Right-handed alpha
Helix 12	12	A	384	395	Right-handed alpha
Helix 13	13	A	474	479	Right-handed alpha
Helix 14	14	A	494	503	Right-handed alpha
Helix 15	15	A	506	510	Right-handed 310
Helix 16	16	A	525	535	Right-handed alpha
Helix 17	17	A	543	552	Right-handed alpha
Helix 18	18	A	574	582	Right-handed alpha
Helix 19	19	A	618	623	Right-handed alpha
Helix 20	20	A	628	637	Right-handed alpha
Helix 21	21	A	638	661	Right-handed alpha
Helix 22	22	A	665	669	Right-handed 310
Helix 23	23	A	672	698	Right-handed alpha
Helix 24	24	A	709	735	Right-handed alpha
Helix 25	25	A	741	750	Right-handed alpha
Helix 26	26	A	754	763	Right-handed alpha
Helix 27	27	A	793	798	Right-handed alpha
Helix 28	28	A	809	846	Right-handed alpha
Helix 29	29	A	867	871	Right-handed 310
Helix 30	30	A	874	876	Right-handed 310
Helix 31	31	A	889	898	Right-handed alpha
Helix 32	32	A	922	945	Right-handed alpha
Helix 33	33	A	960	971	Right-handed alpha
Helix 34	34	A	982	994	Right-handed alpha
Helix 35	35	A	1004	1026	Right-handed alpha
Helix 36	36	A	1027	1034	Right-handed alpha
Helix 37	37	A	1038	1056	Right-handed alpha
Helix 38	38	A	1063	1074	Right-handed alpha
Helix 39	39	A	1098	1107	Right-handed alpha
Helix 40	40	A	1129	1139	Right-handed alpha
Helix 41	41	A	1166	1171	Right-handed alpha
Helix 42	42	A	1198	1206	Right-handed alpha
Helix 43	43	A	1208	1221	Right-handed alpha
Helix 44	44	A	1261	1271	Right-handed alpha
Helix 45	45	A	1312	1317	Right-handed alpha
Helix 46	46	A	1331	1339	Right-handed alpha
Helix 47	47	A	1339	1357	Right-handed alpha
Helix 48	48	A	1358	1360	Right-handed 310
Helix 49	49	A	1364	1375	Right-handed alpha
Helix 50	50	A	1388	1392	Right-handed 310
Helix 51	51	A	1395	1400	Right-handed alpha
Helix 52	52	A	1405	1415	Right-handed alpha
Helix 53	53	A	1423	1430	Right-handed alpha
Helix 54	54	A	1436	1439	Right-handed 310
Helix 55	55	A	1446	1454	Right-handed alpha
Helix 56	56	B	30	41	Right-handed alpha
Helix 57	57	B	44	57	Right-handed alpha
Helix 58	58	B	57	63	Right-handed alpha
Helix 59	59	B	113	119	Right-handed alpha
Helix 60	60	B	185	191	Right-handed alpha
Helix 61	61	B	282	290	Right-handed alpha
Helix 62	62	B	295	302	Right-handed alpha
Helix 63	63	B	307	322	Right-handed alpha
Helix 64	64	B	326	331	Right-handed alpha
Helix 65	65	B	348	359	Right-handed alpha
Helix 66	66	B	370	390	Right-handed alpha
Helix 67	67	B	408	433	Right-handed alpha
Helix 68	68	B	450	464	Right-handed alpha
Helix 69	69	B	487	496	Right-handed alpha
Helix 70	70	B	515	519	Right-handed 310
Helix 71	71	B	551	559	Right-handed alpha
Helix 72	72	B	565	569	Right-handed 310
Helix 73	73	B	592	605	Right-handed alpha
Helix 74	74	B	619	621	Right-handed 310
Helix 75	75	B	654	668	Right-handed alpha
Helix 76	76	B	680	687	Right-handed alpha
Helix 77	77	B	696	701	Right-handed 310
Helix 78	78	B	744	749	Right-handed 310
Helix 79	79	B	758	762	Right-handed 310
Helix 80	80	B	764	777	Right-handed alpha
Helix 81	81	B	784	788	Right-handed 310
Helix 82	82	B	806	811	Right-handed 310
Helix 83	83	B	843	848	Right-handed alpha
Helix 84	84	B	1022	1039	Right-handed alpha
Helix 85	85	B	1051	1062	Right-handed alpha
Helix 86	86	B	1098	1102	Right-handed 310
Helix 87	87	B	1131	1142	Right-handed alpha
Helix 88	88	B	1143	1152	Right-handed alpha
Helix 89	89	B	1197	1210	Right-handed alpha
Helix 90	90	C	26	40	Right-handed alpha
Helix 91	91	C	59	70	Right-handed alpha
Helix 92	92	C	76	80	Right-handed 310
Helix 93	93	C	116	118	Right-handed 310
Helix 94	94	C	167	171	Right-handed 310
Helix 95	95	C	196	201	Right-handed alpha
Helix 96	96	C	204	209	Right-handed 310
Helix 97	97	C	239	268	Right-handed alpha
Helix 98	98	D	53	73	Right-handed alpha
Helix 99	99	D	119	134	Right-handed alpha
Helix 100	100	D	138	151	Right-handed alpha
Helix 101	101	D	156	168	Right-handed alpha
Helix 102	102	D	173	181	Right-handed alpha
Helix 103	103	D	187	192	Right-handed alpha
Helix 104	104	D	203	218	Right-handed alpha
Helix 105	105	E	5	27	Right-handed alpha
Helix 106	106	E	31	35	Right-handed 310
Helix 107	107	E	38	44	Right-handed alpha
Helix 108	108	E	54	59	Right-handed 310
Helix 109	109	E	65	72	Right-handed alpha
Helix 110	110	E	89	104	Right-handed alpha
Helix 111	111	E	117	122	Right-handed alpha
Helix 112	112	E	138	141	Right-handed 310
Helix 113	113	E	143	147	Right-handed 310
Helix 114	114	E	157	168	Right-handed alpha
Helix 115	115	E	171	175	Right-handed 310
Helix 116	116	E	182	189	Right-handed alpha
Helix 117	117	F	86	103	Right-handed alpha
Helix 118	118	F	116	127	Right-handed alpha
Helix 119	119	G	14	18	Right-handed 310
Helix 120	120	G	21	35	Right-handed alpha
Helix 121	121	G	113	115	Right-handed 310
Helix 122	122	J	17	27	Right-handed alpha
Helix 123	123	J	31	39	Right-handed alpha
Helix 124	124	J	43	48	Right-handed alpha
Helix 125	125	J	56	62	Right-handed alpha
Helix 126	126	K	5	10	Right-handed 310
Helix 127	127	K	39	51	Right-handed alpha
Helix 128	128	K	82	112	Right-handed alpha

There are 48 sheets in PDB entry 3FKI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1418	1419	first strand
Strand 2	A	16	21	anti-parallel
Strand 3	B	1212	1217	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	91	first strand
Strand 2	A	235	241	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	161	163	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	177	first strand
Strand 2	A	180	185	anti-parallel
Strand 3	A	198	202	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	345	first strand
Strand 2	B	1128	1130	anti-parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1104	1106	first strand
Strand 2	A	348	355	anti-parallel
Strand 3	A	486	490	anti-parallel
Strand 4	A	442	445	anti-parallel
Strand 5	A	455	460	anti-parallel
Strand 6	A	363	365	parallel
Strand 7	A	468	470	anti-parallel
Strand 8	A	348	355	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	379	first strand
Strand 2	A	431	435	anti-parallel
Strand 3	A	402	406	anti-parallel
Strand 4	A	412	414	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	512	513	first strand
Strand 2	A	518	519	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	542	first strand
Strand 2	A	571	573	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	587	589	first strand
Strand 2	A	606	608	anti-parallel
Strand 3	A	611	614	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	769	770	first strand
Strand 2	A	773	774	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	856	857	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	878	882	first strand
Strand 2	A	953	957	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1280	1287	first strand
Strand 2	A	1303	1309	anti-parallel
Strand 3	A	1116	1119	anti-parallel
Strand 4	A	1328	1329	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1141	1142	first strand
Strand 2	A	1272	1274	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1224	1228	first strand
Strand 2	A	1236	1242	anti-parallel
Strand 3	A	1191	1197	anti-parallel
Strand 4	A	1147	1154	anti-parallel
Strand 5	I	42	45	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1290	1292	first strand
Strand 2	A	1298	1300	anti-parallel

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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	68	79	anti-parallel
Strand 4	G	59	61	anti-parallel
Strand 5	A	1441	1445	anti-parallel
Strand 6	F	132	137	anti-parallel
Strand 7	F	143	147	anti-parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	68	79	anti-parallel
Strand 4	G	43	49	anti-parallel
Strand 5	G	38	39	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	97	first strand
Strand 2	B	125	133	anti-parallel
Strand 3	B	165	171	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	103	first strand
Strand 2	B	109	111	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	204	first strand
Strand 2	B	209	211	anti-parallel
Strand 3	B	481	482	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	407	first strand
Strand 2	B	214	218	anti-parallel
Strand 3	B	497	499	parallel
Strand 4	B	536	538	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	227	first strand
Strand 2	B	234	242	anti-parallel
Strand 3	B	252	259	anti-parallel
Strand 4	B	269	272	anti-parallel
Strand 5	B	280	281	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	690	694	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	651	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	740	741	anti-parallel
Strand 4	B	703	704	parallel

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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	563	564	first strand
Strand 2	B	585	590	anti-parallel
Strand 3	B	578	582	anti-parallel
Strand 4	B	623	627	parallel
Strand 5	B	614	618	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	793	796	first strand
Strand 2	B	853	862	anti-parallel
Strand 3	B	962	972	anti-parallel
Strand 4	B	947	956	anti-parallel
Strand 5	B	904	905	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	805	first strand
Strand 2	B	1042	1043	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	821	822	first strand
Strand 2	B	1091	1092	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	979	980	first strand
Strand 2	B	988	994	anti-parallel
Strand 3	B	838	842	parallel
Strand 4	B	1010	1012	anti-parallel
Strand 5	B	825	827	parallel
Strand 6	B	1085	1088	anti-parallel
Strand 7	B	1069	1070	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	874	first strand
Strand 2	B	914	916	anti-parallel
Strand 3	B	935	936	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1002	first strand
Strand 2	B	1072	1073	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1158	1163	first strand
Strand 2	B	1191	1196	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	13	first strand
Strand 2	C	17	23	anti-parallel
Strand 3	C	228	233	anti-parallel
Strand 4	C	175	179	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	97	103	anti-parallel
Strand 3	C	153	160	anti-parallel
Strand 4	C	45	54	anti-parallel
Strand 5	L	65	68	anti-parallel

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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	143	147	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	44	46	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	62	first strand
Strand 2	E	78	82	anti-parallel
Strand 3	E	107	112	parallel
Strand 4	E	131	136	parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	115	116	parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	155	first strand
Strand 2	E	195	201	anti-parallel
Strand 3	E	207	214	anti-parallel
Strand 4	E	177	178	parallel

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There are 7 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	142	152	anti-parallel
Strand 3	G	157	162	anti-parallel
Strand 4	G	106	111	parallel
Strand 5	G	98	103	anti-parallel
Strand 6	G	86	94	anti-parallel
Strand 7	G	142	152	anti-parallel

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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	120	121	first strand
Strand 2	G	130	131	anti-parallel
Strand 3	G	136	137	anti-parallel

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There are 7 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	54	58	first strand
Strand 2	H	7	16	anti-parallel
Strand 3	H	23	30	anti-parallel
Strand 4	H	37	43	anti-parallel
Strand 5	H	122	125	anti-parallel
Strand 6	H	112	117	anti-parallel
Strand 7	H	100	106	anti-parallel

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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	95	98	first strand
Strand 2	H	141	144	anti-parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	18	first strand
Strand 2	I	25	28	anti-parallel
Strand 3	I	35	37	anti-parallel

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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	70	71	first strand
Strand 2	I	83	86	anti-parallel
Strand 3	I	100	103	anti-parallel
Strand 4	I	109	111	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	23	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3FKI

Analysis of interatomic Contacts of Structural Units in PDB entry:
3FKI