Analysis of interatomic Contacts of Structural Units in PDB entry:
3FN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FN6 entry

There are 2 chains in PDB entry 3FN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 73THR 207
A
 THR 209THR 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3FN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 89Right-handed alpha
Helix 2
2
A
101 104Right-handed 310
Helix 3
3
A
114 121Right-handed alpha
Helix 4
4
A
149 153Right-handed 310
Helix 5
5
A
155 161Right-handed 310
Helix 6
6
A
190 195Right-handed 310
Helix 7
7
A
230 232Right-handed 310
Helix 8
8
A
233 241Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3FN6.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
105 110anti-parallel
Strand 3
A
122 124parallel
Strand 4
A
136 142anti-parallel
Strand 5
A
202 208parallel
Strand 6
A
216 228anti-parallel
Strand 7
A
174 186anti-parallel
Strand 8
A
166 170anti-parallel
Strand 9
A
96 100anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il