Analysis of interatomic Contacts of Structural Units in PDB entry:
3FUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FUT entry

There are 2 chains in PDB entry 3FUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5GLU 268
B
 LYS 3GLU 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3FUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 17Right-handed alpha
Helix 2
2
A
32 44Right-handed alpha
Helix 3
3
A
58 67Right-handed alpha
Helix 4
4
A
77 79Right-handed 310
Helix 5
5
A
80 88Right-handed alpha
Helix 6
6
A
99 103Right-handed 310
Helix 7
7
A
104 108Right-handed 310
Helix 8
8
A
123 134Right-handed alpha
Helix 9
9
A
145 152Right-handed alpha
Helix 10
10
A
161 170Right-handed alpha
Helix 11
11
A
180 182Right-handed 310
Helix 12
12
A
205 216Right-handed alpha
Helix 13
13
A
222 230Right-handed alpha
Helix 14
14
A
233 244Right-handed alpha
Helix 15
15
A
251 255Right-handed 310
Helix 16
16
A
256 268Right-handed alpha
Helix 17
17
B
6 17Right-handed alpha
Helix 18
18
B
32 44Right-handed alpha
Helix 19
19
B
58 67Right-handed alpha
Helix 20
20
B
77 79Right-handed 310
Helix 21
21
B
80 88Right-handed alpha
Helix 22
22
B
99 103Right-handed 310
Helix 23
23
B
104 108Right-handed 310
Helix 24
24
B
122 134Right-handed alpha
Helix 25
25
B
145 152Right-handed alpha
Helix 26
26
B
161 170Right-handed alpha
Helix 27
27
B
180 182Right-handed 310
Helix 28
28
B
205 217Right-handed alpha
Helix 29
29
B
222 229Right-handed alpha
Helix 30
30
B
233 245Right-handed alpha
Helix 31
31
B
251 255Right-handed 310
Helix 32
32
B
256 268Right-handed alpha
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There are 4 sheets in PDB entry 3FUT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
184 185anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
71 75parallel
Strand 3
A
50 53parallel
Strand 4
A
112 118parallel
Strand 5
A
136 144parallel
Strand 6
A
192 199anti-parallel
Strand 7
A
171 179anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
184 185anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 97first strand
Strand 2
B
71 75parallel
Strand 3
B
50 53parallel
Strand 4
B
112 118parallel
Strand 5
B
136 144parallel
Strand 6
B
192 199anti-parallel
Strand 7
B
171 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il