Analysis of interatomic Contacts of Structural Units in PDB entry:
3FVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FVQ entry

There are 2 chains in PDB entry 3FVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 349
B
 THR 2THR 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3FVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 51Right-handed alpha
Helix 2
2
A
76 80Right-handed 310
Helix 3
3
A
96 103Right-handed alpha
Helix 4
4
A
112 126Right-handed alpha
Helix 5
5
A
128 132Right-handed 310
Helix 6
6
A
135 139Right-handed 310
Helix 7
7
A
140 154Right-handed alpha
Helix 8
8
A
170 188Right-handed alpha
Helix 9
9
A
198 206Right-handed alpha
Helix 10
10
A
222 229Right-handed alpha
Helix 11
11
A
232 240Right-handed alpha
Helix 12
12
A
279 281Right-handed 310
Helix 13
13
B
42 51Right-handed alpha
Helix 14
14
B
76 80Right-handed 310
Helix 15
15
B
96 103Right-handed alpha
Helix 16
16
B
112 127Right-handed alpha
Helix 17
17
B
128 132Right-handed 310
Helix 18
18
B
135 139Right-handed 310
Helix 19
19
B
140 154Right-handed alpha
Helix 20
20
B
170 188Right-handed alpha
Helix 21
21
B
198 206Right-handed alpha
Helix 22
22
B
222 229Right-handed alpha
Helix 23
23
B
232 240Right-handed alpha
Helix 24
24
B
279 281Right-handed 310
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There are 8 sheets in PDB entry 3FVQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 27first strand
Strand 2
A
5 14anti-parallel
Strand 3
A
58 63anti-parallel
Strand 4
A
66 69anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
159 163parallel
Strand 3
A
191 195parallel
Strand 4
A
32 37parallel
Strand 5
A
208 213parallel
Strand 6
A
216 221anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 249first strand
Strand 2
A
254 257anti-parallel
Strand 3
A
260 265anti-parallel
Strand 4
B
344 347parallel
Strand 5
A
273 278anti-parallel
Strand 6
A
243 249anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
B
335 340anti-parallel
Strand 3
B
293 304anti-parallel
Strand 4
B
309 315anti-parallel
Strand 5
B
318 324anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 324first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
293 304anti-parallel
Strand 4
A
335 340anti-parallel
Strand 5
B
283 286anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 348first strand
Strand 2
B
260 265parallel
Strand 3
B
254 257anti-parallel
Strand 4
B
243 249anti-parallel
Strand 5
B
273 278anti-parallel
Strand 6
A
344 348anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 27first strand
Strand 2
B
5 14anti-parallel
Strand 3
B
58 63anti-parallel
Strand 4
B
66 70anti-parallel
Strand 5
B
73 74anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 85first strand
Strand 2
B
159 163parallel
Strand 3
B
191 195parallel
Strand 4
B
32 37parallel
Strand 5
B
208 213parallel
Strand 6
B
216 221anti-parallel
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