Analysis of interatomic Contacts of Structural Units in PDB entry:
3FYE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FYE entry

There are 4 chains in PDB entry 3FYE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 17PHE 551
B
 LEU 30HIS 285
C
 TRP 20THR 550
D
 LEU 30HIS 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 3FYE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 56Right-handed alpha
Helix 2
2
A
64 69Right-handed 310
Helix 3
3
A
71 79Right-handed alpha
Helix 4
4
A
84 88Right-handed 310
Helix 5
5
A
91 110Right-handed alpha
Helix 6
6
A
110 116Right-handed alpha
Helix 7
7
A
118 129Right-handed alpha
Helix 8
8
A
135 157Right-handed alpha
Helix 9
9
A
161 165Right-handed 310
Helix 10
10
A
177 182Right-handed alpha
Helix 11
11
A
185 215Right-handed alpha
Helix 12
12
A
221 225Right-handed 310
Helix 13
13
A
226 259Right-handed alpha
Helix 14
14
A
265 269Right-handed 310
Helix 15
15
A
271 306Right-handed alpha
Helix 16
16
A
312 327Right-handed alpha
Helix 17
17
A
328 329Right-handed 310
Helix 18
18
A
330 335Right-handed 310
Helix 19
19
A
341 371Right-handed alpha
Helix 20
20
A
378 403Right-handed alpha
Helix 21
21
A
403 411Right-handed alpha
Helix 22
22
A
413 424Right-handed alpha
Helix 23
23
A
424 445Right-handed alpha
Helix 24
24
A
449 477Right-handed alpha
Helix 25
25
A
487 489Right-handed 310
Helix 26
26
A
490 522Right-handed alpha
Helix 27
27
A
537 542Right-handed 310
Helix 28
28
B
48 83Right-handed alpha
Helix 29
29
B
97 128Right-handed alpha
Helix 30
30
B
163 167Right-handed 310
Helix 31
31
B
173 183Right-handed alpha
Helix 32
32
B
186 190Right-handed 310
Helix 33
33
B
222 225Right-handed 310
Helix 34
34
B
259 263Right-handed 310
Helix 35
35
B
271 282Right-handed alpha
Helix 36
36
C
25 56Right-handed alpha
Helix 37
37
C
64 69Right-handed 310
Helix 38
38
C
73 80Right-handed alpha
Helix 39
39
C
84 88Right-handed 310
Helix 40
40
C
91 110Right-handed alpha
Helix 41
41
C
110 116Right-handed alpha
Helix 42
42
C
118 129Right-handed alpha
Helix 43
43
C
135 157Right-handed alpha
Helix 44
44
C
161 165Right-handed 310
Helix 45
45
C
177 182Right-handed alpha
Helix 46
46
C
185 215Right-handed alpha
Helix 47
47
C
226 259Right-handed alpha
Helix 48
48
C
265 269Right-handed 310
Helix 49
49
C
271 306Right-handed alpha
Helix 50
50
C
312 327Right-handed alpha
Helix 51
51
C
328 329Right-handed 310
Helix 52
52
C
330 335Right-handed 310
Helix 53
53
C
341 371Right-handed alpha
Helix 54
54
C
378 403Right-handed alpha
Helix 55
55
C
403 411Right-handed alpha
Helix 56
56
C
413 424Right-handed alpha
Helix 57
57
C
424 445Right-handed alpha
Helix 58
58
C
449 477Right-handed alpha
Helix 59
59
C
487 489Right-handed 310
Helix 60
60
C
490 522Right-handed alpha
Helix 61
61
C
537 541Right-handed 310
Helix 62
62
D
48 83Right-handed alpha
Helix 63
63
D
97 128Right-handed alpha
Helix 64
64
D
163 167Right-handed 310
Helix 65
65
D
173 183Right-handed alpha
Helix 66
66
D
186 190Right-handed 310
Helix 67
67
D
222 225Right-handed 310
Helix 68
68
D
259 263Right-handed 310
Helix 69
69
D
271 283Right-handed alpha
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There are 7 sheets in PDB entry 3FYE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
523 524anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
246 250parallel
Strand 3
B
265 270anti-parallel
Strand 4
B
198 201parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 158first strand
Strand 2
B
144 149anti-parallel
Strand 3
B
134 141anti-parallel
Strand 4
B
205 212parallel
Strand 5
B
236 241anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 221first strand
Strand 2
B
226 230anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 34first strand
Strand 2
D
246 250parallel
Strand 3
D
265 270anti-parallel
Strand 4
D
198 201parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 158first strand
Strand 2
D
144 149anti-parallel
Strand 3
D
134 141anti-parallel
Strand 4
D
205 212parallel
Strand 5
D
236 241anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
217 221first strand
Strand 2
D
226 230anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il