Analysis of interatomic Contacts of Structural Units in PDB entry:
3G4L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G4L entry

There are 4 chains in PDB entry 3G4L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 249PRO 577
B
 GLU 253GLN 578
C
 THR 252PRO 577
D
 ILE 245GLN 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 89 helices in PDB entry 3G4L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
252 262Right-handed alpha
Helix 2
2
A
263 265Right-handed 310
Helix 3
3
A
271 279Right-handed alpha
Helix 4
4
A
282 295Right-handed alpha
Helix 5
5
A
296 301Right-handed alpha
Helix 6
6
A
304 318Right-handed alpha
Helix 7
7
A
327 343Right-handed alpha
Helix 8
8
A
344 348Right-handed 310
Helix 9
9
A
352 366Right-handed alpha
Helix 10
10
A
374 381Right-handed alpha
Helix 11
11
A
383 389Right-handed alpha
Helix 12
12
A
393 406Right-handed alpha
Helix 13
13
A
407 409Right-handed 310
Helix 14
14
A
419 436Right-handed alpha
Helix 15
15
A
437 440Right-handed 310
Helix 16
16
A
441 455Right-handed alpha
Helix 17
17
A
468 485Right-handed alpha
Helix 18
18
A
486 490Right-handed 310
Helix 19
19
A
491 516Right-handed alpha
Helix 20
20
A
525 529Right-handed 310
Helix 21
21
A
530 542Right-handed alpha
Helix 22
22
A
542 554Right-handed alpha
Helix 23
23
A
558 575Right-handed alpha
Helix 24
24
B
254 262Right-handed alpha
Helix 25
25
B
263 267Right-handed 310
Helix 26
26
B
271 279Right-handed alpha
Helix 27
27
B
282 296Right-handed alpha
Helix 28
28
B
296 302Right-handed alpha
Helix 29
29
B
304 318Right-handed alpha
Helix 30
30
B
327 343Right-handed alpha
Helix 31
31
B
344 348Right-handed 310
Helix 32
32
B
352 366Right-handed alpha
Helix 33
33
B
374 381Right-handed alpha
Helix 34
34
B
383 389Right-handed alpha
Helix 35
35
B
393 406Right-handed alpha
Helix 36
36
B
407 409Right-handed 310
Helix 37
37
B
419 437Right-handed alpha
Helix 38
38
B
438 440Right-handed 310
Helix 39
39
B
441 455Right-handed alpha
Helix 40
40
B
468 485Right-handed alpha
Helix 41
41
B
486 490Right-handed 310
Helix 42
42
B
491 516Right-handed alpha
Helix 43
43
B
530 542Right-handed alpha
Helix 44
44
B
542 554Right-handed alpha
Helix 45
45
B
558 574Right-handed alpha
Helix 46
46
C
253 263Right-handed alpha
Helix 47
47
C
271 279Right-handed alpha
Helix 48
48
C
282 295Right-handed alpha
Helix 49
49
C
296 302Right-handed alpha
Helix 50
50
C
304 318Right-handed alpha
Helix 51
51
C
327 343Right-handed alpha
Helix 52
52
C
344 348Right-handed 310
Helix 53
53
C
352 366Right-handed alpha
Helix 54
54
C
374 381Right-handed alpha
Helix 55
55
C
383 390Right-handed alpha
Helix 56
56
C
393 406Right-handed alpha
Helix 57
57
C
407 409Right-handed 310
Helix 58
58
C
419 436Right-handed alpha
Helix 59
59
C
437 440Right-handed 310
Helix 60
60
C
441 455Right-handed alpha
Helix 61
61
C
468 485Right-handed alpha
Helix 62
62
C
486 490Right-handed 310
Helix 63
63
C
491 516Right-handed alpha
Helix 64
64
C
530 542Right-handed alpha
Helix 65
65
C
542 554Right-handed alpha
Helix 66
66
C
558 575Right-handed alpha
Helix 67
67
D
254 263Right-handed alpha
Helix 68
68
D
264 267Right-handed 310
Helix 69
69
D
271 279Right-handed alpha
Helix 70
70
D
282 295Right-handed alpha
Helix 71
71
D
296 302Right-handed alpha
Helix 72
72
D
304 318Right-handed alpha
Helix 73
73
D
327 343Right-handed alpha
Helix 74
74
D
344 348Right-handed 310
Helix 75
75
D
352 366Right-handed alpha
Helix 76
76
D
374 381Right-handed alpha
Helix 77
77
D
383 389Right-handed alpha
Helix 78
78
D
393 406Right-handed alpha
Helix 79
79
D
407 409Right-handed 310
Helix 80
80
D
419 436Right-handed alpha
Helix 81
81
D
437 440Right-handed 310
Helix 82
82
D
441 455Right-handed alpha
Helix 83
83
D
468 485Right-handed alpha
Helix 84
84
D
486 490Right-handed 310
Helix 85
85
D
491 516Right-handed alpha
Helix 86
86
D
525 529Right-handed 310
Helix 87
87
D
530 542Right-handed alpha
Helix 88
88
D
542 554Right-handed alpha
Helix 89
89
D
558 574Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3G4L.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
458 459first strand
Strand 2
C
463 464anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il