Analysis of interatomic Contacts of Structural Units in PDB entry:
3G5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G5I entry

There are 4 chains in PDB entry 3G5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 311
B
 SER 1ALA 311
C
 ALA 2ALA 311
D
 GLY 0ALA 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3G5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
41 56Right-handed alpha
Helix 3
3
A
103 115Right-handed alpha
Helix 4
4
A
127 137Right-handed alpha
Helix 5
5
A
138 142Right-handed 310
Helix 6
6
A
164 170Right-handed alpha
Helix 7
7
A
170 179Right-handed alpha
Helix 8
8
A
188 193Right-handed alpha
Helix 9
9
A
198 208Right-handed alpha
Helix 10
10
A
210 223Right-handed alpha
Helix 11
11
A
241 250Right-handed alpha
Helix 12
12
A
295 308Right-handed alpha
Helix 13
13
A
309 311Right-handed 310
Helix 14
14
B
12 24Right-handed alpha
Helix 15
15
B
41 56Right-handed alpha
Helix 16
16
B
103 115Right-handed alpha
Helix 17
17
B
127 137Right-handed alpha
Helix 18
18
B
138 142Right-handed 310
Helix 19
19
B
164 170Right-handed alpha
Helix 20
20
B
170 180Right-handed alpha
Helix 21
21
B
188 193Right-handed alpha
Helix 22
22
B
198 208Right-handed alpha
Helix 23
23
B
210 224Right-handed alpha
Helix 24
24
B
241 250Right-handed alpha
Helix 25
25
B
295 307Right-handed alpha
Helix 26
26
B
308 311Right-handed 310
Helix 27
27
C
12 24Right-handed alpha
Helix 28
28
C
41 56Right-handed alpha
Helix 29
29
C
103 115Right-handed alpha
Helix 30
30
C
127 137Right-handed alpha
Helix 31
31
C
138 142Right-handed 310
Helix 32
32
C
164 170Right-handed alpha
Helix 33
33
C
170 180Right-handed alpha
Helix 34
34
C
188 193Right-handed alpha
Helix 35
35
C
198 208Right-handed alpha
Helix 36
36
C
210 222Right-handed alpha
Helix 37
37
C
241 250Right-handed alpha
Helix 38
38
C
295 308Right-handed alpha
Helix 39
39
C
309 311Right-handed 310
Helix 40
40
D
12 24Right-handed alpha
Helix 41
41
D
41 56Right-handed alpha
Helix 42
42
D
103 115Right-handed alpha
Helix 43
43
D
127 137Right-handed alpha
Helix 44
44
D
138 142Right-handed 310
Helix 45
45
D
164 170Right-handed alpha
Helix 46
46
D
170 179Right-handed alpha
Helix 47
47
D
188 193Right-handed alpha
Helix 48
48
D
198 208Right-handed alpha
Helix 49
49
D
210 228Right-handed alpha
Helix 50
50
D
241 250Right-handed alpha
Helix 51
51
D
295 308Right-handed alpha
Helix 52
52
D
309 311Right-handed 310
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There are 12 sheets in PDB entry 3G5I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
28 35parallel
Strand 3
A
3 9parallel
Strand 4
A
119 123parallel
Strand 5
A
144 150parallel
Strand 6
A
184 187parallel
Strand 7
A
288 294parallel
Strand 8
A
254 259anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 197first strand
Strand 2
A
237 238anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
274 276anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 65first strand
Strand 2
B
28 35parallel
Strand 3
B
3 9parallel
Strand 4
B
119 123parallel
Strand 5
B
144 150parallel
Strand 6
B
184 187parallel
Strand 7
B
288 294parallel
Strand 8
B
254 259anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 197first strand
Strand 2
B
237 238anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 263first strand
Strand 2
B
274 276anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 65first strand
Strand 2
C
28 35parallel
Strand 3
C
3 9parallel
Strand 4
C
119 123parallel
Strand 5
C
144 150parallel
Strand 6
C
184 187parallel
Strand 7
C
288 294parallel
Strand 8
C
254 259anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 197first strand
Strand 2
C
237 238anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 263first strand
Strand 2
C
274 276anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
63 65first strand
Strand 2
D
28 35parallel
Strand 3
D
3 9parallel
Strand 4
D
119 123parallel
Strand 5
D
144 150parallel
Strand 6
D
184 187parallel
Strand 7
D
288 294parallel
Strand 8
D
254 259anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
196 197first strand
Strand 2
D
237 238anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
261 263first strand
Strand 2
D
274 276anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il