Analysis of interatomic Contacts of Structural Units in PDB entry:
3G7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G7T entry

There is 1 chain in PDB entry 3G7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3G7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 86Right-handed 310
Helix 2
2
A
100 104Right-handed 310
Helix 3
3
A
131 133Right-handed 310
Helix 4
4
A
210 214Right-handed alpha
Helix 5
5
A
233 236Right-handed 310
Helix 6
6
A
256 264Right-handed alpha
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There are 9 sheets in PDB entry 3G7T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
30 33parallel
Strand 3
A
41 51anti-parallel
Strand 4
A
135 142anti-parallel
Strand 5
A
159 164anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
30 33parallel
Strand 3
A
41 51anti-parallel
Strand 4
A
276 279anti-parallel
Strand 5
A
272 273anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
285 290anti-parallel
Strand 4
A
179 184anti-parallel
Strand 5
A
170 175anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
110 129anti-parallel
Strand 3
A
58 72anti-parallel
Strand 4
A
220 221anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 98first strand
Strand 2
A
110 129anti-parallel
Strand 3
A
196 201anti-parallel
Strand 4
A
204 209anti-parallel
Strand 5
A
268 270anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
249 252anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
333 334parallel
Strand 3
A
357 358anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 314first strand
Strand 2
A
320 326anti-parallel
Strand 3
A
365 369anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
337 340anti-parallel
Strand 3
A
374 380anti-parallel
Strand 4
A
387 393anti-parallel
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