Analysis of interatomic Contacts of Structural Units in PDB entry:
3G85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G85 entry

There is 1 chain in PDB entry 3G85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 65ASN 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3G85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
77 79Right-handed 310
Helix 2
2
A
80 95Right-handed alpha
Helix 3
3
A
110 118Right-handed 310
Helix 4
4
A
132 142Right-handed alpha
Helix 5
5
A
164 179Right-handed alpha
Helix 6
6
A
193 210Right-handed alpha
Helix 7
7
A
215 217Right-handed 310
Helix 8
8
A
225 237Right-handed alpha
Helix 9
9
A
250 264Right-handed alpha
Helix 10
10
A
282 287Right-handed alpha
Helix 11
11
A
298 315Right-handed alpha
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There are 2 sheets in PDB entry 3G85. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 106first strand
Strand 2
A
67 73parallel
Strand 3
A
125 128parallel
Strand 4
A
148 151parallel
Strand 5
A
159 163parallel
Strand 6
A
323 326parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
185 188parallel
Strand 3
A
245 248parallel
Strand 4
A
273 278parallel
Strand 5
A
293 296parallel
Strand 6
A
330 331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il