Analysis of interatomic Contacts of Structural Units in PDB entry:
3GTO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GTO entry

There are 13 chains in PDB entry 3GTO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3ILE 1445
B
ASP 20PHE 1224
C
GLU 3ASP 268
E
ASP 2MET 215
F
LYS 72LEU 155
H
SER 2ARG 146
I
THR 2GLN 120
J
MET 1PRO 65
K
MET 1LEU 114
L
ALA 25ARG 70
R
A 1 G 12
T
C 1 T 28
N
C 1 G 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are124 helices in PDB entry 3GTO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 31Right-handed alpha
Helix 2
2
A
95 103Right-handed alpha
Helix 3
3
A
132 139Right-handed alpha
Helix 4
4
A
140 142Right-handed 310
Helix 5
5
A
203 214Right-handed alpha
Helix 6
6
A
215 222Right-handed alpha
Helix 7
7
A
230 235Right-handed alpha
Helix 8
8
A
243 247Right-handed 310
Helix 9
9
A
261 272Right-handed alpha
Helix 10
10
A
276 281Right-handed alpha
Helix 11
11
A
288 303Right-handed alpha
Helix 12
12
A
334 340Right-handed alpha
Helix 13
13
A
368 372Right-handed alpha
Helix 14
14
A
384 395Right-handed alpha
Helix 15
15
A
471 473Right-handed 310
Helix 16
16
A
474 479Right-handed alpha
Helix 17
17
A
494 503Right-handed alpha
Helix 18
18
A
506 510Right-handed 310
Helix 19
19
A
525 536Right-handed alpha
Helix 20
20
A
543 553Right-handed alpha
Helix 21
21
A
574 582Right-handed alpha
Helix 22
22
A
618 623Right-handed alpha
Helix 23
23
A
628 638Right-handed alpha
Helix 24
24
A
638 659Right-handed alpha
Helix 25
25
A
672 697Right-handed alpha
Helix 26
26
A
711 735Right-handed alpha
Helix 27
27
A
741 750Right-handed alpha
Helix 28
28
A
754 763Right-handed alpha
Helix 29
29
A
793 797Right-handed 310
Helix 30
30
A
809 828Right-handed alpha
Helix 31
31
A
829 844Right-handed alpha
Helix 32
32
A
867 871Right-handed 310
Helix 33
33
A
889 898Right-handed alpha
Helix 34
34
A
903 907Right-handed 310
Helix 35
35
A
915 920Right-handed alpha
Helix 36
36
A
924 947Right-handed alpha
Helix 37
37
A
959 966Right-handed alpha
Helix 38
38
A
984 994Right-handed alpha
Helix 39
39
A
1004 1026Right-handed alpha
Helix 40
40
A
1027 1034Right-handed alpha
Helix 41
41
A
1038 1055Right-handed alpha
Helix 42
42
A
1063 1078Right-handed alpha
Helix 43
43
A
1096 1106Right-handed alpha
Helix 44
44
A
1127 1137Right-handed alpha
Helix 45
45
A
1143 1147Right-handed 310
Helix 46
46
A
1163 1165Right-handed 310
Helix 47
47
A
1166 1172Right-handed alpha
Helix 48
48
A
1200 1205Right-handed alpha
Helix 49
49
A
1208 1221Right-handed alpha
Helix 50
50
A
1255 1269Right-handed alpha
Helix 51
51
A
1312 1317Right-handed alpha
Helix 52
52
A
1331 1340Right-handed alpha
Helix 53
53
A
1340 1359Right-handed alpha
Helix 54
54
A
1364 1377Right-handed alpha
Helix 55
55
A
1388 1392Right-handed 310
Helix 56
56
A
1395 1401Right-handed alpha
Helix 57
57
A
1404 1415Right-handed alpha
Helix 58
58
A
1423 1430Right-handed alpha
Helix 59
59
A
1436 1440Right-handed 310
Helix 60
60
B
26 28Right-handed 310
Helix 61
61
B
29 40Right-handed alpha
Helix 62
62
B
44 56Right-handed alpha
Helix 63
63
B
57 64Right-handed alpha
Helix 64
64
B
113 120Right-handed alpha
Helix 65
65
B
179 184Right-handed 310
Helix 66
66
B
185 193Right-handed alpha
Helix 67
67
B
281 289Right-handed alpha
Helix 68
68
B
296 302Right-handed alpha
Helix 69
69
B
307 320Right-handed alpha
Helix 70
70
B
326 333Right-handed alpha
Helix 71
71
B
347 359Right-handed alpha
Helix 72
72
B
371 390Right-handed alpha
Helix 73
73
B
400 402Right-handed 310
Helix 74
74
B
408 434Right-handed alpha
Helix 75
75
B
450 463Right-handed alpha
Helix 76
76
B
474 478Right-handed 310
Helix 77
77
B
487 496Right-handed alpha
Helix 78
78
B
515 519Right-handed 310
Helix 79
79
B
551 560Right-handed alpha
Helix 80
80
B
592 606Right-handed alpha
Helix 81
81
B
619 621Right-handed 310
Helix 82
82
B
654 667Right-handed alpha
Helix 83
83
B
680 687Right-handed alpha
Helix 84
84
B
695 699Right-handed alpha
Helix 85
85
B
744 749Right-handed 310
Helix 86
86
B
752 756Right-handed 310
Helix 87
87
B
758 762Right-handed 310
Helix 88
88
B
763 774Right-handed alpha
Helix 89
89
B
808 812Right-handed 310
Helix 90
90
B
843 848Right-handed alpha
Helix 91
91
B
1023 1038Right-handed alpha
Helix 92
92
B
1051 1061Right-handed alpha
Helix 93
93
B
1098 1102Right-handed 310
Helix 94
94
B
1121 1125Right-handed 310
Helix 95
95
B
1131 1142Right-handed alpha
Helix 96
96
B
1143 1150Right-handed alpha
Helix 97
97
B
1197 1210Right-handed alpha
Helix 98
98
C
26 41Right-handed alpha
Helix 99
99
C
59 70Right-handed alpha
Helix 100
100
C
76 80Right-handed 310
Helix 101
101
C
196 201Right-handed alpha
Helix 102
102
C
204 208Right-handed 310
Helix 103
103
C
239 264Right-handed alpha
Helix 104
104
E
6 26Right-handed alpha
Helix 105
105
E
38 46Right-handed alpha
Helix 106
106
E
54 58Right-handed 310
Helix 107
107
E
65 69Right-handed 310
Helix 108
108
E
92 104Right-handed alpha
Helix 109
109
E
137 141Right-handed 310
Helix 110
110
E
143 147Right-handed 310
Helix 111
111
E
157 167Right-handed alpha
Helix 112
112
E
171 175Right-handed 310
Helix 113
113
E
182 189Right-handed alpha
Helix 114
114
F
86 103Right-handed alpha
Helix 115
115
F
116 127Right-handed alpha
Helix 116
116
H
83 87Right-handed 310
Helix 117
117
I
59 65Right-handed 310
Helix 118
118
J
17 27Right-handed alpha
Helix 119
119
J
31 39Right-handed alpha
Helix 120
120
J
44 52Right-handed alpha
Helix 121
121
J
56 63Right-handed alpha
Helix 122
122
K
5 10Right-handed 310
Helix 123
123
K
39 50Right-handed alpha
Helix 124
124
K
82 112Right-handed alpha
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There are 41 sheets in PDB entry 3GTO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1418 1419first strand
Strand 2
A
16 21anti-parallel
Strand 3
B
1212 1217anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
82 90first strand
Strand 2
A
236 241anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
175 177first strand
Strand 2
A
180 182anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
344 345first strand
Strand 2
B
1128 1129anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1104 1106first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
486 490anti-parallel
Strand 4
A
441 445anti-parallel
Strand 5
A
455 463anti-parallel
Strand 6
A
363 367parallel
Strand 7
A
468 470anti-parallel
Strand 8
A
348 355parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
375 379first strand
Strand 2
A
431 435anti-parallel
Strand 3
A
402 406anti-parallel
Strand 4
A
412 413anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
512 513first strand
Strand 2
A
518 519anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 542first strand
Strand 2
A
571 573anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
588 589first strand
Strand 2
A
606 608anti-parallel
Strand 3
A
611 614anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
766 767first strand
Strand 2
A
799 800anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
849 850first strand
Strand 2
A
856 857anti-parallel
Strand 3
A
863 865anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
879 882first strand
Strand 2
A
953 956anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1282 1287first strand
Strand 2
A
1303 1308anti-parallel
Strand 3
A
1116 1119anti-parallel
Strand 4
A
1328 1329anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1225 1228first strand
Strand 2
A
1237 1241anti-parallel
Strand 3
A
1191 1196anti-parallel
Strand 4
A
1151 1154anti-parallel
Strand 5
I
44 45anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1290 1292first strand
Strand 2
A
1298 1300anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1442 1444first strand
Strand 2
F
133 138anti-parallel
Strand 3
F
142 147anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 97first strand
Strand 2
B
125 130anti-parallel
Strand 3
B
165 171anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
101 103first strand
Strand 2
B
109 111anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
203 205first strand
Strand 2
B
208 210anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
215 218first strand
Strand 2
B
404 407anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
224 227first strand
Strand 2
B
234 242anti-parallel
Strand 3
B
252 259anti-parallel
Strand 4
B
269 272anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
497 498first strand
Strand 2
B
537 538anti-parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
633 635anti-parallel
Strand 3
B
693 694anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
585 590first strand
Strand 2
B
578 582anti-parallel
Strand 3
B
623 627parallel
Strand 4
B
614 618anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
703 704first strand
Strand 2
B
740 741parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 796first strand
Strand 2
B
853 858anti-parallel
Strand 3
B
961 972anti-parallel
Strand 4
B
861 862anti-parallel
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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 796first strand
Strand 2
B
853 858anti-parallel
Strand 3
B
961 972anti-parallel
Strand 4
B
946 957anti-parallel
Strand 5
B
904 906anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
804 805first strand
Strand 2
B
1042 1043parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
979 980first strand
Strand 2
B
988 994anti-parallel
Strand 3
B
838 842parallel
Strand 4
B
1010 1012anti-parallel
Strand 5
B
824 827parallel
Strand 6
B
1085 1089anti-parallel
Strand 7
B
1069 1070anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
915 917first strand
Strand 2
B
934 936anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1001 1002first strand
Strand 2
B
1072 1073anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1158 1163first strand
Strand 2
B
1191 1196anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
7 13first strand
Strand 2
C
17 23anti-parallel
Strand 3
C
228 233anti-parallel
Strand 4
C
176 177anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
119 120first strand
Strand 2
C
97 104anti-parallel
Strand 3
C
152 162anti-parallel
Strand 4
C
43 50anti-parallel
Strand 5
L
66 67anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
111 113first strand
Strand 2
C
145 147anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
61 62first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
107 111parallel
Strand 4
E
131 135parallel
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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
153 155first strand
Strand 2
E
196 201anti-parallel
Strand 3
E
207 214anti-parallel
Strand 4
E
177 178parallel
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There are 9 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
95 98first strand
Strand 2
H
141 145anti-parallel
Strand 3
H
54 58anti-parallel
Strand 4
H
7 16anti-parallel
Strand 5
H
24 30anti-parallel
Strand 6
H
37 42anti-parallel
Strand 7
H
121 127anti-parallel
Strand 8
H
112 118anti-parallel
Strand 9
H
100 106anti-parallel
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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
15 19first strand
Strand 2
I
24 28anti-parallel
Strand 3
I
35 37anti-parallel
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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
83 84first strand
Strand 2
I
100 103anti-parallel
Strand 3
I
109 111anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
20 23first strand
Strand 2
K
30 34anti-parallel
Strand 3
K
72 77anti-parallel
Strand 4
K
56 62anti-parallel
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