Analysis of interatomic Contacts of Structural Units in PDB entry:
3GZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GZ9 entry

There is 1 chain in PDB entry 3GZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 207ASP 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3GZ9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
207 226Right-handed alpha
Helix 2
2
A
229 239Right-handed alpha
Helix 3
3
A
251 260Right-handed alpha
Helix 4
4
A
276 302Right-handed alpha
Helix 5
5
A
310 331Right-handed alpha
Helix 6
6
A
350 356Right-handed alpha
Helix 7
7
A
359 376Right-handed alpha
Helix 8
8
A
380 393Right-handed alpha
Helix 9
9
A
402 425Right-handed alpha
Helix 10
10
A
430 460Right-handed alpha
Helix 11
11
A
466 474Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3GZ9.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
Strand 4
A
334 335anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il