Analysis of interatomic Contacts of Structural Units in PDB entry:
3H4E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3H4E entry

There are 12 chains in PDB entry 3H4E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 1	GLY 220
B	PRO 1	GLN 219
C	PRO 1	GLN 219
D	PRO 1	GLN 219
E	PRO 1	GLN 219
F	PRO 1	GLN 219
G	PRO 1	GLY 220
H	PRO 1	GLN 219
I	PRO 1	GLN 219
J	PRO 1	GLN 219
K	PRO 1	GLN 219
L	PRO 1	GLN 219

There are144 helices in PDB entry 3H4E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	31	Right-handed alpha
Helix 2	2	A	35	44	Right-handed alpha
Helix 3	3	A	48	58	Right-handed alpha
Helix 4	4	A	62	84	Right-handed alpha
Helix 5	5	A	100	105	Right-handed alpha
Helix 6	6	A	110	119	Right-handed alpha
Helix 7	7	A	125	145	Right-handed alpha
Helix 8	8	A	149	153	Right-handed 310
Helix 9	9	A	160	177	Right-handed alpha
Helix 10	10	A	183	193	Right-handed alpha
Helix 11	11	A	195	206	Right-handed alpha
Helix 12	12	A	210	218	Right-handed alpha
Helix 13	13	B	16	31	Right-handed alpha
Helix 14	14	B	35	44	Right-handed alpha
Helix 15	15	B	48	58	Right-handed alpha
Helix 16	16	B	62	83	Right-handed alpha
Helix 17	17	B	100	105	Right-handed alpha
Helix 18	18	B	110	119	Right-handed alpha
Helix 19	19	B	125	145	Right-handed alpha
Helix 20	20	B	149	153	Right-handed 310
Helix 21	21	B	160	175	Right-handed alpha
Helix 22	22	B	184	193	Right-handed alpha
Helix 23	23	B	195	205	Right-handed alpha
Helix 24	24	B	210	218	Right-handed alpha
Helix 25	25	C	16	31	Right-handed alpha
Helix 26	26	C	35	44	Right-handed alpha
Helix 27	27	C	48	58	Right-handed alpha
Helix 28	28	C	62	84	Right-handed alpha
Helix 29	29	C	100	105	Right-handed alpha
Helix 30	30	C	110	119	Right-handed alpha
Helix 31	31	C	125	145	Right-handed alpha
Helix 32	32	C	149	153	Right-handed 310
Helix 33	33	C	160	176	Right-handed alpha
Helix 34	34	C	178	190	Right-handed alpha
Helix 35	35	C	195	205	Right-handed alpha
Helix 36	36	C	210	218	Right-handed alpha
Helix 37	37	D	16	31	Right-handed alpha
Helix 38	38	D	35	44	Right-handed alpha
Helix 39	39	D	48	58	Right-handed alpha
Helix 40	40	D	62	83	Right-handed alpha
Helix 41	41	D	100	105	Right-handed alpha
Helix 42	42	D	110	120	Right-handed alpha
Helix 43	43	D	125	145	Right-handed alpha
Helix 44	44	D	149	153	Right-handed 310
Helix 45	45	D	160	175	Right-handed alpha
Helix 46	46	D	188	193	Right-handed alpha
Helix 47	47	D	195	205	Right-handed alpha
Helix 48	48	D	210	218	Right-handed alpha
Helix 49	49	E	16	31	Right-handed alpha
Helix 50	50	E	35	44	Right-handed alpha
Helix 51	51	E	48	58	Right-handed alpha
Helix 52	52	E	62	83	Right-handed alpha
Helix 53	53	E	100	105	Right-handed alpha
Helix 54	54	E	110	120	Right-handed alpha
Helix 55	55	E	125	145	Right-handed alpha
Helix 56	56	E	149	153	Right-handed 310
Helix 57	57	E	160	177	Right-handed alpha
Helix 58	58	E	183	193	Right-handed alpha
Helix 59	59	E	195	205	Right-handed alpha
Helix 60	60	E	210	218	Right-handed alpha
Helix 61	61	F	16	31	Right-handed alpha
Helix 62	62	F	35	44	Right-handed alpha
Helix 63	63	F	48	58	Right-handed alpha
Helix 64	64	F	62	84	Right-handed alpha
Helix 65	65	F	100	105	Right-handed alpha
Helix 66	66	F	110	119	Right-handed alpha
Helix 67	67	F	125	146	Right-handed alpha
Helix 68	68	F	149	153	Right-handed 310
Helix 69	69	F	160	177	Right-handed alpha
Helix 70	70	F	183	193	Right-handed alpha
Helix 71	71	F	195	206	Right-handed alpha
Helix 72	72	F	210	218	Right-handed alpha
Helix 73	73	G	16	31	Right-handed alpha
Helix 74	74	G	35	44	Right-handed alpha
Helix 75	75	G	48	58	Right-handed alpha
Helix 76	76	G	62	84	Right-handed alpha
Helix 77	77	G	100	105	Right-handed alpha
Helix 78	78	G	110	119	Right-handed alpha
Helix 79	79	G	125	145	Right-handed alpha
Helix 80	80	G	149	153	Right-handed 310
Helix 81	81	G	160	177	Right-handed alpha
Helix 82	82	G	183	193	Right-handed alpha
Helix 83	83	G	195	205	Right-handed alpha
Helix 84	84	G	210	218	Right-handed alpha
Helix 85	85	H	16	31	Right-handed alpha
Helix 86	86	H	35	44	Right-handed alpha
Helix 87	87	H	48	58	Right-handed alpha
Helix 88	88	H	62	84	Right-handed alpha
Helix 89	89	H	100	105	Right-handed alpha
Helix 90	90	H	110	119	Right-handed alpha
Helix 91	91	H	125	145	Right-handed alpha
Helix 92	92	H	149	153	Right-handed 310
Helix 93	93	H	160	176	Right-handed alpha
Helix 94	94	H	188	193	Right-handed alpha
Helix 95	95	H	195	205	Right-handed alpha
Helix 96	96	H	210	218	Right-handed alpha
Helix 97	97	I	16	31	Right-handed alpha
Helix 98	98	I	35	44	Right-handed alpha
Helix 99	99	I	48	58	Right-handed alpha
Helix 100	100	I	62	84	Right-handed alpha
Helix 101	101	I	100	105	Right-handed alpha
Helix 102	102	I	110	119	Right-handed alpha
Helix 103	103	I	125	146	Right-handed alpha
Helix 104	104	I	149	153	Right-handed 310
Helix 105	105	I	160	175	Right-handed alpha
Helix 106	106	I	184	193	Right-handed alpha
Helix 107	107	I	195	206	Right-handed alpha
Helix 108	108	I	210	218	Right-handed alpha
Helix 109	109	J	16	31	Right-handed alpha
Helix 110	110	J	35	44	Right-handed alpha
Helix 111	111	J	48	58	Right-handed alpha
Helix 112	112	J	62	84	Right-handed alpha
Helix 113	113	J	100	105	Right-handed alpha
Helix 114	114	J	110	119	Right-handed alpha
Helix 115	115	J	125	145	Right-handed alpha
Helix 116	116	J	149	153	Right-handed 310
Helix 117	117	J	160	176	Right-handed alpha
Helix 118	118	J	178	190	Right-handed alpha
Helix 119	119	J	195	206	Right-handed alpha
Helix 120	120	J	210	218	Right-handed alpha
Helix 121	121	K	16	31	Right-handed alpha
Helix 122	122	K	35	44	Right-handed alpha
Helix 123	123	K	48	58	Right-handed alpha
Helix 124	124	K	62	83	Right-handed alpha
Helix 125	125	K	100	105	Right-handed alpha
Helix 126	126	K	110	119	Right-handed alpha
Helix 127	127	K	125	145	Right-handed alpha
Helix 128	128	K	149	153	Right-handed 310
Helix 129	129	K	160	175	Right-handed alpha
Helix 130	130	K	188	193	Right-handed alpha
Helix 131	131	K	195	206	Right-handed alpha
Helix 132	132	K	210	218	Right-handed alpha
Helix 133	133	L	16	31	Right-handed alpha
Helix 134	134	L	35	44	Right-handed alpha
Helix 135	135	L	48	58	Right-handed alpha
Helix 136	136	L	62	83	Right-handed alpha
Helix 137	137	L	100	105	Right-handed alpha
Helix 138	138	L	110	120	Right-handed alpha
Helix 139	139	L	125	146	Right-handed alpha
Helix 140	140	L	149	153	Right-handed 310
Helix 141	141	L	160	177	Right-handed alpha
Helix 142	142	L	183	193	Right-handed alpha
Helix 143	143	L	195	206	Right-handed alpha
Helix 144	144	L	210	218	Right-handed alpha

There are 12 sheets in PDB entry 3H4E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	4	first strand
Strand 2	C	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	4	first strand
Strand 2	D	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	4	first strand
Strand 2	E	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	4	first strand
Strand 2	F	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	2	4	first strand
Strand 2	G	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	2	4	first strand
Strand 2	H	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	2	4	first strand
Strand 2	I	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2	4	first strand
Strand 2	J	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	2	4	first strand
Strand 2	K	10	12	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	4	first strand
Strand 2	L	10	12	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3H4E

Analysis of interatomic Contacts of Structural Units in PDB entry:
3H4E