Analysis of interatomic Contacts of Structural Units in PDB entry:
3H90


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H90 entry

There are 4 chains in PDB entry 3H90 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 8VAL 290
B
LEU 8VAL 290
C
LEU 8VAL 290
D
LEU 8VAL 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3H90. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
11 22Right-handed alpha
Helix 2
2
A
23 30Right-handed alpha
Helix 3
3
A
44 64Right-handed alpha
Helix 4
4
A
77 104Right-handed alpha
Helix 5
5
A
118 142Right-handed alpha
Helix 6
6
A
144 159Right-handed alpha
Helix 7
7
A
179 206Right-handed alpha
Helix 8
8
A
211 225Right-handed alpha
Helix 9
9
A
256 275Right-handed alpha
Helix 10
10
B
11 21Right-handed alpha
Helix 11
11
B
22 26Right-handed 310
Helix 12
12
B
41 65Right-handed alpha
Helix 13
13
B
77 99Right-handed alpha
Helix 14
14
B
118 142Right-handed alpha
Helix 15
15
B
144 158Right-handed alpha
Helix 16
16
B
179 206Right-handed alpha
Helix 17
17
B
211 225Right-handed alpha
Helix 18
18
B
256 275Right-handed alpha
Helix 19
19
C
11 22Right-handed alpha
Helix 20
20
C
23 30Right-handed alpha
Helix 21
21
C
44 64Right-handed alpha
Helix 22
22
C
77 104Right-handed alpha
Helix 23
23
C
118 142Right-handed alpha
Helix 24
24
C
144 159Right-handed alpha
Helix 25
25
C
179 206Right-handed alpha
Helix 26
26
C
211 225Right-handed alpha
Helix 27
27
C
256 275Right-handed alpha
Helix 28
28
D
11 21Right-handed alpha
Helix 29
29
D
22 26Right-handed 310
Helix 30
30
D
41 64Right-handed alpha
Helix 31
31
D
77 102Right-handed alpha
Helix 32
32
D
118 142Right-handed alpha
Helix 33
33
D
144 158Right-handed alpha
Helix 34
34
D
179 206Right-handed alpha
Helix 35
35
D
211 225Right-handed alpha
Helix 36
36
D
256 275Right-handed alpha
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There are 4 sheets in PDB entry 3H90. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
230 239first strand
Strand 2
A
242 250anti-parallel
Strand 3
A
279 285parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
230 239first strand
Strand 2
B
242 250anti-parallel
Strand 3
B
279 285parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
230 239first strand
Strand 2
C
242 250anti-parallel
Strand 3
C
279 285parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
230 239first strand
Strand 2
D
242 250anti-parallel
Strand 3
D
279 285parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il