Analysis of interatomic Contacts of Structural Units in PDB entry:
3H9U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H9U entry

There are 4 chains in PDB entry 3H9U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 4TYR 437
B
 TYR 4TYR 437
C
 SER -2TYR 437
D
 MET -1TYR 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 3H9U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 10Right-handed 310
Helix 2
2
A
11 26Right-handed alpha
Helix 3
3
A
26 37Right-handed alpha
Helix 4
4
A
54 67Right-handed alpha
Helix 5
5
A
82 92Right-handed alpha
Helix 6
6
A
103 114Right-handed alpha
Helix 7
7
A
132 142Right-handed alpha
Helix 8
8
A
156 170Right-handed alpha
Helix 9
9
A
182 187Right-handed alpha
Helix 10
10
A
188 207Right-handed alpha
Helix 11
11
A
221 234Right-handed alpha
Helix 12
12
A
244 254Right-handed alpha
Helix 13
13
A
260 265Right-handed alpha
Helix 14
14
A
285 289Right-handed 310
Helix 15
15
A
301 305Right-handed 310
Helix 16
16
A
306 314Right-handed alpha
Helix 17
17
A
340 342Right-handed 310
Helix 18
18
A
343 349Right-handed alpha
Helix 19
19
A
353 374Right-handed alpha
Helix 20
20
A
392 408Right-handed alpha
Helix 21
21
A
415 422Right-handed alpha
Helix 22
22
B
8 10Right-handed 310
Helix 23
23
B
11 25Right-handed alpha
Helix 24
24
B
26 37Right-handed alpha
Helix 25
25
B
54 67Right-handed alpha
Helix 26
26
B
82 93Right-handed alpha
Helix 27
27
B
103 114Right-handed alpha
Helix 28
28
B
132 142Right-handed alpha
Helix 29
29
B
156 170Right-handed alpha
Helix 30
30
B
182 187Right-handed alpha
Helix 31
31
B
188 207Right-handed alpha
Helix 32
32
B
221 234Right-handed alpha
Helix 33
33
B
244 254Right-handed alpha
Helix 34
34
B
260 265Right-handed alpha
Helix 35
35
B
285 289Right-handed 310
Helix 36
36
B
301 305Right-handed 310
Helix 37
37
B
306 314Right-handed alpha
Helix 38
38
B
340 342Right-handed 310
Helix 39
39
B
343 348Right-handed alpha
Helix 40
40
B
353 374Right-handed alpha
Helix 41
41
B
382 386Right-handed 310
Helix 42
42
B
392 408Right-handed alpha
Helix 43
43
B
415 423Right-handed alpha
Helix 44
44
C
8 10Right-handed 310
Helix 45
45
C
11 25Right-handed alpha
Helix 46
46
C
26 37Right-handed alpha
Helix 47
47
C
54 67Right-handed alpha
Helix 48
48
C
82 93Right-handed alpha
Helix 49
49
C
103 114Right-handed alpha
Helix 50
50
C
132 142Right-handed alpha
Helix 51
51
C
156 169Right-handed alpha
Helix 52
52
C
182 187Right-handed alpha
Helix 53
53
C
188 207Right-handed alpha
Helix 54
54
C
221 234Right-handed alpha
Helix 55
55
C
244 254Right-handed alpha
Helix 56
56
C
260 265Right-handed alpha
Helix 57
57
C
285 289Right-handed 310
Helix 58
58
C
301 305Right-handed 310
Helix 59
59
C
306 314Right-handed alpha
Helix 60
60
C
340 342Right-handed 310
Helix 61
61
C
343 349Right-handed alpha
Helix 62
62
C
353 374Right-handed alpha
Helix 63
63
C
392 408Right-handed alpha
Helix 64
64
C
415 422Right-handed alpha
Helix 65
65
D
8 10Right-handed 310
Helix 66
66
D
11 25Right-handed alpha
Helix 67
67
D
26 37Right-handed alpha
Helix 68
68
D
54 67Right-handed alpha
Helix 69
69
D
82 92Right-handed alpha
Helix 70
70
D
103 114Right-handed alpha
Helix 71
71
D
132 142Right-handed alpha
Helix 72
72
D
156 170Right-handed alpha
Helix 73
73
D
182 187Right-handed alpha
Helix 74
74
D
188 207Right-handed alpha
Helix 75
75
D
221 234Right-handed alpha
Helix 76
76
D
244 254Right-handed alpha
Helix 77
77
D
260 265Right-handed alpha
Helix 78
78
D
285 289Right-handed 310
Helix 79
79
D
301 305Right-handed 310
Helix 80
80
D
306 314Right-handed alpha
Helix 81
81
D
340 342Right-handed 310
Helix 82
82
D
343 349Right-handed alpha
Helix 83
83
D
353 374Right-handed alpha
Helix 84
84
D
392 408Right-handed alpha
Helix 85
85
D
415 422Right-handed alpha
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There are 8 sheets in PDB entry 3H9U. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
96 98parallel
Strand 3
A
70 74parallel
Strand 4
A
46 50parallel
Strand 5
A
126 129parallel
Strand 6
A
152 154parallel
Strand 7
A
176 178parallel
Strand 8
A
388 390parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
237 241parallel
Strand 3
A
214 218parallel
Strand 4
A
270 273parallel
Strand 5
A
293 297parallel
Strand 6
A
334 338parallel
Strand 7
A
324 328anti-parallel
Strand 8
A
316 321anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
70 74parallel
Strand 3
B
46 50parallel
Strand 4
B
126 129parallel
Strand 5
B
152 154parallel
Strand 6
B
176 178parallel
Strand 7
B
388 389parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
237 241parallel
Strand 3
B
214 218parallel
Strand 4
B
270 273parallel
Strand 5
B
293 297parallel
Strand 6
B
334 338parallel
Strand 7
B
324 328anti-parallel
Strand 8
B
316 321anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 6first strand
Strand 2
C
96 98parallel
Strand 3
C
70 74parallel
Strand 4
C
46 50parallel
Strand 5
C
126 129parallel
Strand 6
C
152 154parallel
Strand 7
C
176 178parallel
Strand 8
C
388 389parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 258first strand
Strand 2
C
237 241parallel
Strand 3
C
214 218parallel
Strand 4
C
270 273parallel
Strand 5
C
293 297parallel
Strand 6
C
334 338parallel
Strand 7
C
324 328anti-parallel
Strand 8
C
316 321anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
96 97first strand
Strand 2
D
70 74parallel
Strand 3
D
46 50parallel
Strand 4
D
126 129parallel
Strand 5
D
152 154parallel
Strand 6
D
176 178parallel
Strand 7
D
388 389parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
257 258first strand
Strand 2
D
237 241parallel
Strand 3
D
214 218parallel
Strand 4
D
270 273parallel
Strand 5
D
293 297parallel
Strand 6
D
334 338parallel
Strand 7
D
324 328anti-parallel
Strand 8
D
316 321anti-parallel
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