Analysis of interatomic Contacts of Structural Units in PDB entry:
3HB1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HB1 entry

There are 4 chains in PDB entry 3HB1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 265LEU 538
B
GLU 268LEU 538
C
SER 265LEU 538
D
GLU 268LEU 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3HB1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
282 288Right-handed alpha
Helix 2
2
A
288 294Right-handed alpha
Helix 3
3
A
297 320Right-handed alpha
Helix 4
4
A
321 326Right-handed alpha
Helix 5
5
A
327 329Right-handed 310
Helix 6
6
A
332 340Right-handed 310
Helix 7
7
A
375 395Right-handed alpha
Helix 8
8
A
397 403Right-handed alpha
Helix 9
9
A
405 421Right-handed alpha
Helix 10
10
A
423 438Right-handed alpha
Helix 11
11
A
450 461Right-handed alpha
Helix 12
12
A
468 470Right-handed 310
Helix 13
13
A
479 492Right-handed alpha
Helix 14
14
A
503 513Right-handed alpha
Helix 15
15
A
522 535Right-handed alpha
Helix 16
16
B
282 288Right-handed alpha
Helix 17
17
B
288 294Right-handed alpha
Helix 18
18
B
297 320Right-handed alpha
Helix 19
19
B
321 326Right-handed alpha
Helix 20
20
B
336 340Right-handed 310
Helix 21
21
B
377 395Right-handed alpha
Helix 22
22
B
397 403Right-handed alpha
Helix 23
23
B
403 421Right-handed alpha
Helix 24
24
B
423 438Right-handed alpha
Helix 25
25
B
450 461Right-handed alpha
Helix 26
26
B
468 470Right-handed 310
Helix 27
27
B
479 492Right-handed alpha
Helix 28
28
B
503 513Right-handed alpha
Helix 29
29
B
522 535Right-handed alpha
Helix 30
30
C
282 287Right-handed alpha
Helix 31
31
C
288 295Right-handed alpha
Helix 32
32
C
297 320Right-handed alpha
Helix 33
33
C
321 326Right-handed alpha
Helix 34
34
C
327 329Right-handed 310
Helix 35
35
C
374 395Right-handed alpha
Helix 36
36
C
397 403Right-handed alpha
Helix 37
37
C
405 421Right-handed alpha
Helix 38
38
C
423 438Right-handed alpha
Helix 39
39
C
450 461Right-handed alpha
Helix 40
40
C
468 470Right-handed 310
Helix 41
41
C
478 492Right-handed alpha
Helix 42
42
C
503 513Right-handed alpha
Helix 43
43
C
522 535Right-handed alpha
Helix 44
44
D
282 288Right-handed alpha
Helix 45
45
D
288 295Right-handed alpha
Helix 46
46
D
297 321Right-handed alpha
Helix 47
47
D
321 326Right-handed alpha
Helix 48
48
D
332 340Right-handed 310
Helix 49
49
D
344 348Right-handed 310
Helix 50
50
D
372 395Right-handed alpha
Helix 51
51
D
397 403Right-handed alpha
Helix 52
52
D
403 421Right-handed alpha
Helix 53
53
D
423 438Right-handed alpha
Helix 54
54
D
450 461Right-handed alpha
Helix 55
55
D
468 470Right-handed 310
Helix 56
56
D
479 492Right-handed alpha
Helix 57
57
D
503 513Right-handed alpha
Helix 58
58
D
522 535Right-handed alpha
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There are 4 sheets in PDB entry 3HB1. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
472 474first strand
Strand 2
A
441 447parallel
Strand 3
A
269 273parallel
Strand 4
A
496 501parallel
Strand 5
A
517 519parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
536 537first strand
Strand 2
D
517 519anti-parallel
Strand 3
D
496 501parallel
Strand 4
D
269 273parallel
Strand 5
D
441 447parallel
Strand 6
D
472 474parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
472 474first strand
Strand 2
B
441 447parallel
Strand 3
B
269 273parallel
Strand 4
B
496 501parallel
Strand 5
B
517 519parallel
Strand 6
C
536 537anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
472 474first strand
Strand 2
C
441 447parallel
Strand 3
C
269 273parallel
Strand 4
C
496 501parallel
Strand 5
C
517 519parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il