Analysis of interatomic Contacts of Structural Units in PDB entry:
3HD6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HD6 entry

There is 1 chain in PDB entry 3HD6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1SER 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3HD6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 29Right-handed alpha
Helix 2
2
A
54 72Right-handed alpha
Helix 3
3
A
72 78Right-handed alpha
Helix 4
4
A
79 81Right-handed 310
Helix 5
5
A
84 110Right-handed alpha
Helix 6
6
A
121 143Right-handed alpha
Helix 7
7
A
147 171Right-handed alpha
Helix 8
8
A
184 199Right-handed alpha
Helix 9
9
A
203 208Right-handed 310
Helix 10
10
A
214 236Right-handed alpha
Helix 11
11
A
242 271Right-handed alpha
Helix 12
12
A
278 285Right-handed alpha
Helix 13
13
A
287 293Right-handed alpha
Helix 14
14
A
302 333Right-handed alpha
Helix 15
15
A
339 344Right-handed alpha
Helix 16
16
A
344 361Right-handed alpha
Helix 17
17
A
384 417Right-handed alpha
Helix 18
18
A
431 435Right-handed 310
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There is 1 sheet ( A) in PDB entry 3HD6.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
118 119parallel
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