Analysis of interatomic Contacts of Structural Units in PDB entry:
3HGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HGQ entry

There are 4 chains in PDB entry 3HGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 27HIS 331
B
 THR 27THR 328
C
 THR 27THR 328
D
 THR 27THR 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3HGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 52Right-handed alpha
Helix 2
2
A
52 62Right-handed alpha
Helix 3
3
A
67 87Right-handed alpha
Helix 4
4
A
88 91Right-handed 310
Helix 5
5
A
104 111Right-handed alpha
Helix 6
6
A
113 127Right-handed alpha
Helix 7
7
A
140 151Right-handed alpha
Helix 8
8
A
213 221Right-handed alpha
Helix 9
9
A
243 252Right-handed alpha
Helix 10
10
A
259 274Right-handed alpha
Helix 11
11
A
284 290Right-handed alpha
Helix 12
12
A
292 294Right-handed 310
Helix 13
13
A
295 301Right-handed alpha
Helix 14
14
A
318 328Right-handed alpha
Helix 15
15
B
38 52Right-handed alpha
Helix 16
16
B
52 62Right-handed alpha
Helix 17
17
B
67 87Right-handed alpha
Helix 18
18
B
88 91Right-handed 310
Helix 19
19
B
104 111Right-handed alpha
Helix 20
20
B
113 127Right-handed alpha
Helix 21
21
B
140 151Right-handed alpha
Helix 22
22
B
213 221Right-handed alpha
Helix 23
23
B
243 252Right-handed alpha
Helix 24
24
B
259 274Right-handed alpha
Helix 25
25
B
284 290Right-handed alpha
Helix 26
26
B
292 294Right-handed 310
Helix 27
27
B
295 301Right-handed alpha
Helix 28
28
B
318 328Right-handed alpha
Helix 29
29
C
38 52Right-handed alpha
Helix 30
30
C
52 62Right-handed alpha
Helix 31
31
C
67 87Right-handed alpha
Helix 32
32
C
88 91Right-handed 310
Helix 33
33
C
104 112Right-handed alpha
Helix 34
34
C
113 127Right-handed alpha
Helix 35
35
C
140 151Right-handed alpha
Helix 36
36
C
213 221Right-handed alpha
Helix 37
37
C
243 252Right-handed alpha
Helix 38
38
C
259 274Right-handed alpha
Helix 39
39
C
284 290Right-handed alpha
Helix 40
40
C
292 294Right-handed 310
Helix 41
41
C
295 301Right-handed alpha
Helix 42
42
C
318 328Right-handed alpha
Helix 43
43
D
38 52Right-handed alpha
Helix 44
44
D
52 62Right-handed alpha
Helix 45
45
D
67 87Right-handed alpha
Helix 46
46
D
88 91Right-handed 310
Helix 47
47
D
104 112Right-handed alpha
Helix 48
48
D
113 127Right-handed alpha
Helix 49
49
D
140 151Right-handed alpha
Helix 50
50
D
213 221Right-handed alpha
Helix 51
51
D
243 252Right-handed alpha
Helix 52
52
D
259 274Right-handed alpha
Helix 53
53
D
284 290Right-handed alpha
Helix 54
54
D
292 294Right-handed 310
Helix 55
55
D
295 301Right-handed alpha
Helix 56
56
D
318 328Right-handed alpha
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There are 4 sheets in PDB entry 3HGQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
235 240parallel
Strand 3
A
199 204parallel
Strand 4
A
131 137parallel
Strand 5
A
176 182parallel
Strand 6
A
156 159parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
235 240parallel
Strand 3
B
199 204parallel
Strand 4
B
131 137parallel
Strand 5
B
176 182parallel
Strand 6
B
156 159parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
235 240parallel
Strand 3
C
199 204parallel
Strand 4
C
131 137parallel
Strand 5
C
176 182parallel
Strand 6
C
156 159parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
235 240parallel
Strand 3
D
199 204parallel
Strand 4
D
131 137parallel
Strand 5
D
176 182parallel
Strand 6
D
156 159parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il