Analysis of interatomic Contacts of Structural Units in PDB entry:
3HI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HI6 entry

There are 6 chains in PDB entry 3HI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 128TYR 307
B
 GLY 128TYR 307
H
 GLU 1SER 220
L
 ILE 2GLY 211
X
 GLU 1SER 220
Y
 ILE 2ARG 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 3HI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
143 161Right-handed alpha
Helix 2
2
A
182 190Right-handed alpha
Helix 3
3
A
191 197Right-handed alpha
Helix 4
4
A
207 219Right-handed alpha
Helix 5
5
A
221 225Right-handed 310
Helix 6
6
A
248 252Right-handed 310
Helix 7
7
A
270 278Right-handed alpha
Helix 8
8
A
281 284Right-handed 310
Helix 9
9
A
289 293Right-handed alpha
Helix 10
10
A
294 296Right-handed 310
Helix 11
11
A
297 304Right-handed alpha
Helix 12
12
B
143 161Right-handed alpha
Helix 13
13
B
182 190Right-handed alpha
Helix 14
14
B
191 197Right-handed alpha
Helix 15
15
B
207 219Right-handed alpha
Helix 16
16
B
248 252Right-handed 310
Helix 17
17
B
267 278Right-handed alpha
Helix 18
18
B
281 284Right-handed 310
Helix 19
19
B
289 293Right-handed alpha
Helix 20
20
B
297 303Right-handed alpha
Helix 21
21
H
28 32Right-handed 310
Helix 22
22
H
62 65Right-handed 310
Helix 23
23
H
87 91Right-handed 310
Helix 24
24
H
163 165Right-handed 310
Helix 25
25
H
194 198Right-handed 310
Helix 26
26
H
208 211Right-handed 310
Helix 27
27
L
79 83Right-handed 310
Helix 28
28
L
122 126Right-handed 310
Helix 29
29
L
182 188Right-handed alpha
Helix 30
30
X
28 32Right-handed 310
Helix 31
31
X
87 91Right-handed 310
Helix 32
32
X
163 165Right-handed 310
Helix 33
33
X
194 196Right-handed 310
Helix 34
34
X
208 211Right-handed 310
Helix 35
35
Y
79 83Right-handed 310
Helix 36
36
Y
120 126Right-handed alpha
Helix 37
37
Y
182 187Right-handed alpha
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There are 24 sheets in PDB entry 3HI6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
166 173anti-parallel
Strand 3
A
130 137parallel
Strand 4
A
231 238parallel
Strand 5
A
255 260parallel
Strand 6
A
286 288parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 181first strand
Strand 2
B
166 173anti-parallel
Strand 3
B
130 137parallel
Strand 4
B
231 238parallel
Strand 5
B
255 260parallel
Strand 6
B
286 288parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
114 118parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
107 110anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
142 152anti-parallel
Strand 3
H
183 192anti-parallel
Strand 4
H
170 172anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 131first strand
Strand 2
H
142 152anti-parallel
Strand 3
H
183 192anti-parallel
Strand 4
H
176 177anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
158 161first strand
Strand 2
H
201 207anti-parallel
Strand 3
H
212 218anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
101 105parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
101 105parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
96 97anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
113 117first strand
Strand 2
L
128 138anti-parallel
Strand 3
L
172 181anti-parallel
Strand 4
L
158 162anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
152 153first strand
Strand 2
L
144 149anti-parallel
Strand 3
L
190 196anti-parallel
Strand 4
L
204 209anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
3 7first strand
Strand 2
X
18 25anti-parallel
Strand 3
X
78 83anti-parallel
Strand 4
X
68 73anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
11 12first strand
Strand 2
X
114 118parallel
Strand 3
X
92 99anti-parallel
Strand 4
X
34 39anti-parallel
Strand 5
X
45 51anti-parallel
Strand 6
X
58 60anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
11 12first strand
Strand 2
X
114 118parallel
Strand 3
X
92 99anti-parallel
Strand 4
X
107 110anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
127 131first strand
Strand 2
X
142 152anti-parallel
Strand 3
X
183 192anti-parallel
Strand 4
X
170 172anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
127 131first strand
Strand 2
X
142 152anti-parallel
Strand 3
X
183 192anti-parallel
Strand 4
X
176 177anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
158 161first strand
Strand 2
X
202 207anti-parallel
Strand 3
X
212 217anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
4 7first strand
Strand 2
Y
19 25anti-parallel
Strand 3
Y
70 75anti-parallel
Strand 4
Y
62 67anti-parallel
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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
10 14first strand
Strand 2
Y
101 106parallel
Strand 3
Y
84 90anti-parallel
Strand 4
Y
33 38anti-parallel
Strand 5
Y
45 49anti-parallel
Strand 6
Y
53 54anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
10 14first strand
Strand 2
Y
101 106parallel
Strand 3
Y
84 90anti-parallel
Strand 4
Y
96 97anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
113 117first strand
Strand 2
Y
128 138anti-parallel
Strand 3
Y
172 181anti-parallel
Strand 4
Y
158 162anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
152 153first strand
Strand 2
Y
144 149anti-parallel
Strand 3
Y
190 196anti-parallel
Strand 4
Y
204 209anti-parallel
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