Analysis of interatomic Contacts of Structural Units in PDB entry:
3HLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HLV entry

There are 4 chains in PDB entry 3HLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 304ARG 548
B
 ASN 304ARG 548
C
 LYS 688ASP 696
D
 HIS 687ASP 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 3HLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
311 323Right-handed alpha
Helix 2
2
A
338 363Right-handed alpha
Helix 3
3
A
371 395Right-handed alpha
Helix 4
4
A
413 418Right-handed 310
Helix 5
5
A
420 438Right-handed alpha
Helix 6
6
A
441 456Right-handed alpha
Helix 7
7
A
457 461Right-handed 310
Helix 8
8
A
465 493Right-handed alpha
Helix 9
9
A
496 531Right-handed alpha
Helix 10
10
A
537 546Right-handed alpha
Helix 11
11
B
311 323Right-handed alpha
Helix 12
12
B
338 363Right-handed alpha
Helix 13
13
B
366 370Right-handed 310
Helix 14
14
B
371 395Right-handed alpha
Helix 15
15
B
412 416Right-handed alpha
Helix 16
16
B
420 438Right-handed alpha
Helix 17
17
B
441 457Right-handed alpha
Helix 18
18
B
458 461Right-handed 310
Helix 19
19
B
468 493Right-handed alpha
Helix 20
20
B
496 531Right-handed alpha
Helix 21
21
B
537 545Right-handed alpha
Helix 22
22
C
688 696Right-handed alpha
Helix 23
23
D
688 694Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3HLV. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 403first strand
Strand 2
A
409 411anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 405first strand
Strand 2
B
408 411anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il