Analysis of interatomic Contacts of Structural Units in PDB entry:
3HN3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HN3 entry

There are 4 chains in PDB entry 3HN3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 22GLU 632
B
 GLY 22THR 633
D
 LEU 23THR 633
E
 LEU 23GLU 632
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 3HN3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 61Right-handed alpha
Helix 2
2
A
62 66Right-handed 310
Helix 3
3
A
67 72Right-handed 310
Helix 4
4
A
89 94Right-handed alpha
Helix 5
5
A
108 114Right-handed alpha
Helix 6
6
A
153 158Right-handed alpha
Helix 7
7
A
362 377Right-handed alpha
Helix 8
8
A
389 400Right-handed alpha
Helix 9
9
A
414 418Right-handed 310
Helix 10
10
A
419 438Right-handed alpha
Helix 11
11
A
456 474Right-handed alpha
Helix 12
12
A
492 496Right-handed 310
Helix 13
13
A
513 515Right-handed 310
Helix 14
14
A
516 533Right-handed alpha
Helix 15
15
A
558 575Right-handed alpha
Helix 16
16
A
616 632Right-handed alpha
Helix 17
17
B
56 61Right-handed alpha
Helix 18
18
B
62 66Right-handed 310
Helix 19
19
B
67 72Right-handed 310
Helix 20
20
B
89 94Right-handed alpha
Helix 21
21
B
108 114Right-handed alpha
Helix 22
22
B
153 158Right-handed alpha
Helix 23
23
B
362 377Right-handed alpha
Helix 24
24
B
389 400Right-handed alpha
Helix 25
25
B
414 418Right-handed 310
Helix 26
26
B
419 438Right-handed alpha
Helix 27
27
B
456 474Right-handed alpha
Helix 28
28
B
492 496Right-handed 310
Helix 29
29
B
513 515Right-handed 310
Helix 30
30
B
516 533Right-handed alpha
Helix 31
31
B
558 577Right-handed alpha
Helix 32
32
B
616 633Right-handed alpha
Helix 33
33
D
56 61Right-handed alpha
Helix 34
34
D
62 66Right-handed 310
Helix 35
35
D
67 72Right-handed 310
Helix 36
36
D
108 114Right-handed alpha
Helix 37
37
D
153 158Right-handed alpha
Helix 38
38
D
362 377Right-handed alpha
Helix 39
39
D
389 400Right-handed alpha
Helix 40
40
D
414 418Right-handed 310
Helix 41
41
D
419 438Right-handed alpha
Helix 42
42
D
456 474Right-handed alpha
Helix 43
43
D
492 496Right-handed 310
Helix 44
44
D
513 515Right-handed 310
Helix 45
45
D
516 533Right-handed alpha
Helix 46
46
D
558 577Right-handed alpha
Helix 47
47
D
616 632Right-handed alpha
Helix 48
48
E
56 61Right-handed alpha
Helix 49
49
E
62 66Right-handed 310
Helix 50
50
E
67 72Right-handed 310
Helix 51
51
E
108 114Right-handed alpha
Helix 52
52
E
153 158Right-handed alpha
Helix 53
53
E
362 377Right-handed alpha
Helix 54
54
E
389 400Right-handed alpha
Helix 55
55
E
414 418Right-handed 310
Helix 56
56
E
419 438Right-handed alpha
Helix 57
57
E
456 474Right-handed alpha
Helix 58
58
E
492 496Right-handed 310
Helix 59
59
E
513 515Right-handed 310
Helix 60
60
E
516 533Right-handed alpha
Helix 61
61
E
558 575Right-handed alpha
Helix 62
62
E
616 632Right-handed alpha
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There are 28 sheets in PDB entry 3HN3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
218 224anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
149 152anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 79first strand
Strand 2
A
43 49anti-parallel
Strand 3
A
98 105anti-parallel
Strand 4
A
166 173anti-parallel
Strand 5
A
129 134anti-parallel
Strand 6
A
137 143anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
200 203anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 238first strand
Strand 2
A
241 251anti-parallel
Strand 3
A
277 282anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 274first strand
Strand 2
A
256 263anti-parallel
Strand 3
A
301 311anti-parallel
Strand 4
A
314 324anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 331first strand
Strand 2
A
336 338anti-parallel
Strand 3
A
341 343anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 349first strand
Strand 2
A
380 382parallel
Strand 3
A
402 406parallel
Strand 4
A
443 450parallel
Strand 5
A
479 483parallel
Strand 6
A
499 502parallel
Strand 7
A
536 540parallel
Strand 8
A
581 586parallel
Strand 9
A
345 349parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
218 223anti-parallel
Strand 3
B
118 123anti-parallel
Strand 4
B
149 152anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 79first strand
Strand 2
B
43 49anti-parallel
Strand 3
B
98 105anti-parallel
Strand 4
B
166 173anti-parallel
Strand 5
B
129 134anti-parallel
Strand 6
B
137 143anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 188first strand
Strand 2
B
200 203anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 238first strand
Strand 2
B
241 251anti-parallel
Strand 3
B
277 283anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 274first strand
Strand 2
B
256 263anti-parallel
Strand 3
B
301 311anti-parallel
Strand 4
B
314 324anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 331first strand
Strand 2
B
336 338anti-parallel
Strand 3
B
341 342anti-parallel
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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 349first strand
Strand 2
B
380 382parallel
Strand 3
B
402 406parallel
Strand 4
B
443 450parallel
Strand 5
B
479 483parallel
Strand 6
B
499 502parallel
Strand 7
B
536 540parallel
Strand 8
B
581 586parallel
Strand 9
B
345 349parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 40first strand
Strand 2
D
218 224anti-parallel
Strand 3
D
117 123anti-parallel
Strand 4
D
149 152anti-parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 79first strand
Strand 2
D
43 49anti-parallel
Strand 3
D
98 105anti-parallel
Strand 4
D
166 173anti-parallel
Strand 5
D
129 134anti-parallel
Strand 6
D
137 143anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 188first strand
Strand 2
D
200 203anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 238first strand
Strand 2
D
241 251anti-parallel
Strand 3
D
277 282anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
269 274first strand
Strand 2
D
256 263anti-parallel
Strand 3
D
301 311anti-parallel
Strand 4
D
314 324anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 331first strand
Strand 2
D
336 338anti-parallel
Strand 3
D
341 343anti-parallel
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There are 9 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
345 349first strand
Strand 2
D
380 382parallel
Strand 3
D
402 406parallel
Strand 4
D
443 450parallel
Strand 5
D
479 483parallel
Strand 6
D
499 502parallel
Strand 7
D
536 540parallel
Strand 8
D
581 586parallel
Strand 9
D
345 349parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 40first strand
Strand 2
E
218 224anti-parallel
Strand 3
E
117 123anti-parallel
Strand 4
E
149 152anti-parallel
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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
75 79first strand
Strand 2
E
43 49anti-parallel
Strand 3
E
98 105anti-parallel
Strand 4
E
166 173anti-parallel
Strand 5
E
129 134anti-parallel
Strand 6
E
137 143anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
185 188first strand
Strand 2
E
200 203anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
227 238first strand
Strand 2
E
241 251anti-parallel
Strand 3
E
277 282anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
269 274first strand
Strand 2
E
256 263anti-parallel
Strand 3
E
301 311anti-parallel
Strand 4
E
314 324anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
329 331first strand
Strand 2
E
336 338anti-parallel
Strand 3
E
341 343anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
345 349first strand
Strand 2
E
380 382parallel
Strand 3
E
402 406parallel
Strand 4
E
443 450parallel
Strand 5
E
479 483parallel
Strand 6
E
499 502parallel
Strand 7
E
536 540parallel
Strand 8
E
581 586parallel
Strand 9
E
345 349parallel
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