Analysis of interatomic Contacts of Structural Units in PDB entry:
3HVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HVN entry

There is 1 chain in PDB entry 3HVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 32GLU 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3HVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 40Right-handed alpha
Helix 2
2
A
44 47Right-handed 310
Helix 3
3
A
106 111Right-handed alpha
Helix 4
4
A
146 163Right-handed alpha
Helix 5
5
A
185 193Right-handed alpha
Helix 6
6
A
196 205Right-handed alpha
Helix 7
7
A
207 214Right-handed alpha
Helix 8
8
A
237 242Right-handed alpha
Helix 9
9
A
286 297Right-handed alpha
Helix 10
10
A
307 312Right-handed alpha
Helix 11
11
A
335 347Right-handed alpha
Helix 12
12
A
414 416Right-handed 310
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There are 11 sheets in PDB entry 3HVN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
372 387parallel
Strand 3
A
69 84anti-parallel
Strand 4
A
62 66anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
355 363anti-parallel
Strand 3
A
262 280anti-parallel
Strand 4
A
314 320anti-parallel
Strand 5
A
329 334anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 104first strand
Strand 2
A
262 280anti-parallel
Strand 3
A
355 363anti-parallel
Strand 4
A
86 88anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
355 363anti-parallel
Strand 3
A
262 280anti-parallel
Strand 4
A
314 320anti-parallel
Strand 5
A
329 334anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 334first strand
Strand 2
A
314 320anti-parallel
Strand 3
A
262 280anti-parallel
Strand 4
A
217 232anti-parallel
Strand 5
A
124 129anti-parallel
Strand 6
A
138 142anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 142first strand
Strand 2
A
124 129anti-parallel
Strand 3
A
217 232anti-parallel
Strand 4
A
175 182anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 490first strand
Strand 2
A
477 485anti-parallel
Strand 3
A
389 412parallel
Strand 4
A
431 442anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 490first strand
Strand 2
A
477 485anti-parallel
Strand 3
A
493 496anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
493 496first strand
Strand 2
A
477 485anti-parallel
Strand 3
A
389 412parallel
Strand 4
A
418 424anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 442first strand
Strand 2
A
389 412anti-parallel
Strand 3
A
446 456anti-parallel
Strand 4
A
464 472anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 424first strand
Strand 2
A
389 412anti-parallel
Strand 3
A
446 456anti-parallel
Strand 4
A
464 472anti-parallel
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