Analysis of interatomic Contacts of Structural Units in PDB entry:
3HYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HYT entry

There are 3 chains in PDB entry 3HYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ASN 261
B
 LYS 2SER 260
C
 LYS 2ASN 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3HYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 25Right-handed alpha
Helix 2
2
A
71 84Right-handed alpha
Helix 3
3
A
97 111Right-handed alpha
Helix 4
4
A
121 128Right-handed alpha
Helix 5
5
A
133 142Right-handed alpha
Helix 6
6
A
155 165Right-handed alpha
Helix 7
7
A
178 190Right-handed alpha
Helix 8
8
A
197 211Right-handed alpha
Helix 9
9
A
213 219Right-handed 310
Helix 10
10
A
221 224Right-handed 310
Helix 11
11
A
225 234Right-handed alpha
Helix 12
12
A
239 259Right-handed alpha
Helix 13
13
B
15 25Right-handed alpha
Helix 14
14
B
71 84Right-handed alpha
Helix 15
15
B
97 112Right-handed alpha
Helix 16
16
B
121 128Right-handed alpha
Helix 17
17
B
133 142Right-handed alpha
Helix 18
18
B
150 152Right-handed 310
Helix 19
19
B
153 165Right-handed alpha
Helix 20
20
B
178 190Right-handed alpha
Helix 21
21
B
197 211Right-handed alpha
Helix 22
22
B
212 220Right-handed alpha
Helix 23
23
B
221 224Right-handed 310
Helix 24
24
B
225 234Right-handed alpha
Helix 25
25
B
239 260Right-handed alpha
Helix 26
26
C
15 25Right-handed alpha
Helix 27
27
C
74 82Right-handed alpha
Helix 28
28
C
97 111Right-handed alpha
Helix 29
29
C
121 128Right-handed alpha
Helix 30
30
C
133 142Right-handed alpha
Helix 31
31
C
155 165Right-handed alpha
Helix 32
32
C
178 192Right-handed alpha
Helix 33
33
C
197 211Right-handed alpha
Helix 34
34
C
212 214Right-handed 310
Helix 35
35
C
215 220Right-handed alpha
Helix 36
36
C
221 224Right-handed 310
Helix 37
37
C
225 234Right-handed alpha
Helix 38
38
C
239 260Right-handed alpha
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There are 4 sheets in PDB entry 3HYT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
51 56anti-parallel
Strand 4
A
3 10parallel
Strand 5
A
88 94parallel
Strand 6
A
115 120parallel
Strand 7
A
145 147parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
260 261anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
41 46anti-parallel
Strand 3
B
51 56anti-parallel
Strand 4
B
3 10parallel
Strand 5
B
88 94parallel
Strand 6
B
115 120parallel
Strand 7
B
145 147parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 46first strand
Strand 2
C
51 56anti-parallel
Strand 3
C
3 10parallel
Strand 4
C
88 94parallel
Strand 5
C
115 120parallel
Strand 6
C
145 147parallel
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