Analysis of interatomic Contacts of Structural Units in PDB entry:
3HYW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3HYW entry

There are 18 chains in PDB entry 3HYW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	SER 155
A	PHE 157	ILE 346
A	ILE 348	CYS 430
B	ALA 2	SER 155
B	PHE 157	ILE 346
B	ILE 348	CYS 430
C	ALA 2	SER 155
C	PHE 157	ILE 346
C	ILE 348	CYS 430
D	ALA 2	SER 155
D	PHE 157	ILE 346
D	ILE 348	CYS 430
E	ALA 2	SER 155
E	PHE 157	ILE 346
E	ILE 348	CYS 430
F	ALA 2	SER 155
F	PHE 157	ILE 346
F	ILE 348	CYS 430

There are 78 helices in PDB entry 3HYW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	25	Right-handed alpha
Helix 2	2	A	44	50	Right-handed alpha
Helix 3	3	A	54	57	Right-handed 310
Helix 4	4	A	65	69	Right-handed 310
Helix 5	5	A	115	120	Right-handed alpha
Helix 6	6	A	125	142	Right-handed alpha
Helix 7	7	A	157	174	Right-handed alpha
Helix 8	8	A	176	180	Right-handed 310
Helix 9	9	A	201	213	Right-handed alpha
Helix 10	10	A	257	262	Right-handed alpha
Helix 11	11	A	313	333	Right-handed alpha
Helix 12	12	A	376	396	Right-handed alpha
Helix 13	13	A	400	412	Right-handed alpha
Helix 14	14	B	11	25	Right-handed alpha
Helix 15	15	B	44	50	Right-handed alpha
Helix 16	16	B	54	57	Right-handed 310
Helix 17	17	B	65	69	Right-handed 310
Helix 18	18	B	115	120	Right-handed alpha
Helix 19	19	B	125	142	Right-handed alpha
Helix 20	20	B	157	174	Right-handed alpha
Helix 21	21	B	176	180	Right-handed 310
Helix 22	22	B	201	213	Right-handed alpha
Helix 23	23	B	257	262	Right-handed alpha
Helix 24	24	B	313	333	Right-handed alpha
Helix 25	25	B	376	396	Right-handed alpha
Helix 26	26	B	400	412	Right-handed alpha
Helix 27	27	C	11	25	Right-handed alpha
Helix 28	28	C	44	50	Right-handed alpha
Helix 29	29	C	54	57	Right-handed 310
Helix 30	30	C	65	70	Right-handed 310
Helix 31	31	C	115	120	Right-handed alpha
Helix 32	32	C	125	142	Right-handed alpha
Helix 33	33	C	157	174	Right-handed alpha
Helix 34	34	C	176	180	Right-handed 310
Helix 35	35	C	201	213	Right-handed alpha
Helix 36	36	C	257	262	Right-handed alpha
Helix 37	37	C	313	333	Right-handed alpha
Helix 38	38	C	376	396	Right-handed alpha
Helix 39	39	C	400	412	Right-handed alpha
Helix 40	40	D	11	25	Right-handed alpha
Helix 41	41	D	44	50	Right-handed alpha
Helix 42	42	D	54	57	Right-handed 310
Helix 43	43	D	65	69	Right-handed 310
Helix 44	44	D	115	120	Right-handed alpha
Helix 45	45	D	125	142	Right-handed alpha
Helix 46	46	D	157	174	Right-handed alpha
Helix 47	47	D	176	180	Right-handed 310
Helix 48	48	D	201	213	Right-handed alpha
Helix 49	49	D	257	262	Right-handed alpha
Helix 50	50	D	313	333	Right-handed alpha
Helix 51	51	D	376	396	Right-handed alpha
Helix 52	52	D	400	412	Right-handed alpha
Helix 53	53	E	11	25	Right-handed alpha
Helix 54	54	E	44	50	Right-handed alpha
Helix 55	55	E	54	57	Right-handed 310
Helix 56	56	E	65	69	Right-handed 310
Helix 57	57	E	115	120	Right-handed alpha
Helix 58	58	E	125	142	Right-handed alpha
Helix 59	59	E	157	174	Right-handed alpha
Helix 60	60	E	176	180	Right-handed 310
Helix 61	61	E	201	213	Right-handed alpha
Helix 62	62	E	257	263	Right-handed alpha
Helix 63	63	E	313	333	Right-handed alpha
Helix 64	64	E	376	396	Right-handed alpha
Helix 65	65	E	400	412	Right-handed alpha
Helix 66	66	F	11	25	Right-handed alpha
Helix 67	67	F	44	50	Right-handed alpha
Helix 68	68	F	54	57	Right-handed 310
Helix 69	69	F	65	69	Right-handed 310
Helix 70	70	F	115	120	Right-handed alpha
Helix 71	71	F	125	142	Right-handed alpha
Helix 72	72	F	157	174	Right-handed alpha
Helix 73	73	F	176	180	Right-handed 310
Helix 74	74	F	201	213	Right-handed alpha
Helix 75	75	F	257	262	Right-handed alpha
Helix 76	76	F	313	333	Right-handed alpha
Helix 77	77	F	376	396	Right-handed alpha
Helix 78	78	F	400	412	Right-handed alpha

There are 48 sheets in PDB entry 3HYW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	74	first strand
Strand 2	A	29	33	parallel
Strand 3	A	4	8	parallel
Strand 4	A	100	103	parallel
Strand 5	A	289	291	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	59	61	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	82	first strand
Strand 2	A	87	90	anti-parallel
Strand 3	A	95	97	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	253	255	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	218	first strand
Strand 2	A	182	185	parallel
Strand 3	A	146	150	parallel
Strand 4	A	247	251	parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	226	first strand
Strand 2	A	230	234	anti-parallel
Strand 3	A	240	244	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	416	418	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	350	first strand
Strand 2	A	355	361	anti-parallel
Strand 3	A	369	375	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	74	first strand
Strand 2	B	29	33	parallel
Strand 3	B	4	8	parallel
Strand 4	B	100	103	parallel
Strand 5	B	289	291	parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	59	61	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	82	first strand
Strand 2	B	87	90	anti-parallel
Strand 3	B	95	97	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	253	255	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	218	first strand
Strand 2	B	182	185	parallel
Strand 3	B	146	150	parallel
Strand 4	B	247	251	parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	226	first strand
Strand 2	B	230	234	anti-parallel
Strand 3	B	240	244	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	416	418	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	350	first strand
Strand 2	B	355	361	anti-parallel
Strand 3	B	369	375	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	74	first strand
Strand 2	C	29	33	parallel
Strand 3	C	4	8	parallel
Strand 4	C	100	103	parallel
Strand 5	C	289	291	parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	40	first strand
Strand 2	C	59	61	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	82	first strand
Strand 2	C	87	90	anti-parallel
Strand 3	C	95	97	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	110	first strand
Strand 2	C	253	255	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	218	first strand
Strand 2	C	182	185	parallel
Strand 3	C	146	150	parallel
Strand 4	C	247	251	parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	222	226	first strand
Strand 2	C	230	234	anti-parallel
Strand 3	C	240	244	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	416	418	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	350	first strand
Strand 2	C	355	361	anti-parallel
Strand 3	C	369	375	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	74	first strand
Strand 2	D	29	33	parallel
Strand 3	D	4	8	parallel
Strand 4	D	100	103	parallel
Strand 5	D	289	291	parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	40	first strand
Strand 2	D	59	61	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	82	first strand
Strand 2	D	87	90	anti-parallel
Strand 3	D	95	97	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	110	first strand
Strand 2	D	253	255	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	218	first strand
Strand 2	D	182	185	parallel
Strand 3	D	146	150	parallel
Strand 4	D	247	251	parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	222	226	first strand
Strand 2	D	230	234	anti-parallel
Strand 3	D	240	244	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	416	418	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	350	first strand
Strand 2	D	355	361	anti-parallel
Strand 3	D	369	375	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	74	first strand
Strand 2	E	29	33	parallel
Strand 3	E	4	8	parallel
Strand 4	E	100	103	parallel
Strand 5	E	289	291	parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	40	first strand
Strand 2	E	59	61	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	82	first strand
Strand 2	E	87	90	anti-parallel
Strand 3	E	95	97	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	110	first strand
Strand 2	E	253	255	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	218	first strand
Strand 2	E	182	185	parallel
Strand 3	E	146	150	parallel
Strand 4	E	247	251	parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	222	226	first strand
Strand 2	E	230	234	anti-parallel
Strand 3	E	240	244	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	341	first strand
Strand 2	E	416	418	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	345	350	first strand
Strand 2	E	355	361	anti-parallel
Strand 3	E	369	375	anti-parallel

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There are 5 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	74	first strand
Strand 2	F	29	33	parallel
Strand 3	F	4	8	parallel
Strand 4	F	100	103	parallel
Strand 5	F	289	291	parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	40	first strand
Strand 2	F	59	61	anti-parallel

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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	78	82	first strand
Strand 2	F	87	90	anti-parallel
Strand 3	F	95	97	anti-parallel

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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	110	first strand
Strand 2	F	253	255	anti-parallel

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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	216	218	first strand
Strand 2	F	182	185	parallel
Strand 3	F	146	150	parallel
Strand 4	F	247	251	parallel

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There are 3 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	222	226	first strand
Strand 2	F	230	234	anti-parallel
Strand 3	F	240	244	anti-parallel

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There are 2 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	339	341	first strand
Strand 2	F	416	418	anti-parallel

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There are 3 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	345	350	first strand
Strand 2	F	355	361	anti-parallel
Strand 3	F	369	375	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3HYW

Analysis of interatomic Contacts of Structural Units in PDB entry:
3HYW