Analysis of interatomic Contacts of Structural Units in PDB entry:
3LB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LB2 entry

There are 2 chains in PDB entry 3LB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1LYS 137
B
GLY 1LYS 137
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3LB2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1 12Right-handed alpha
Helix 2
2
A
12 28Right-handed alpha
Helix 3
3
A
29 35Right-handed 310
Helix 4
4
A
42 48Right-handed alpha
Helix 5
5
A
49 70Right-handed alpha
Helix 6
6
A
76 86Right-handed alpha
Helix 7
7
A
87 90Right-handed 310
Helix 8
8
A
93 111Right-handed alpha
Helix 9
9
A
116 134Right-handed alpha
Helix 10
10
B
1 11Right-handed alpha
Helix 11
11
B
12 28Right-handed alpha
Helix 12
12
B
29 35Right-handed 310
Helix 13
13
B
42 48Right-handed alpha
Helix 14
14
B
51 70Right-handed alpha
Helix 15
15
B
76 86Right-handed alpha
Helix 16
16
B
87 90Right-handed 310
Helix 17
17
B
93 111Right-handed alpha
Helix 18
18
B
116 134Right-handed alpha
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There are no sheets in PDB entry 3LB2

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il