Analysis of interatomic Contacts of Structural Units in PDB entry:
3LGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LGY entry

There is 1 chain in PDB entry 3LGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 39ASP 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 3LGY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
47 55Right-handed alpha
Helix 2
2
A
95 99Right-handed alpha
Helix 3
3
A
238 251Right-handed alpha
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There are 2 sheets in PDB entry 3LGY. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 63first strand
Strand 2
A
77 84anti-parallel
Strand 3
A
90 94anti-parallel
Strand 4
A
127 131anti-parallel
Strand 5
A
113 122anti-parallel
Strand 6
A
104 107anti-parallel
Strand 7
A
58 63anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 159first strand
Strand 2
A
167 175anti-parallel
Strand 3
A
190 192anti-parallel
Strand 4
A
233 237anti-parallel
Strand 5
A
212 217anti-parallel
Strand 6
A
204 207anti-parallel
Strand 7
A
154 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il