Analysis of interatomic Contacts of Structural Units in PDB entry:
3LH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LH9 entry

There are 2 chains in PDB entry 3LH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9ASP 297
B
 SER 9GLY 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3LH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 22Right-handed 310
Helix 2
2
A
78 80Right-handed 310
Helix 3
3
B
78 80Right-handed 310
Helix 4
4
B
251 253Right-handed 310
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There are 14 sheets in PDB entry 3LH9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 16first strand
Strand 2
A
46 54anti-parallel
Strand 3
A
103 109anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
34 40anti-parallel
Strand 3
A
141 149parallel
Strand 4
A
124 134anti-parallel
Strand 5
A
66 76anti-parallel
Strand 6
A
84 94anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
34 40anti-parallel
Strand 3
A
141 149parallel
Strand 4
A
124 134anti-parallel
Strand 5
A
119 120anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
97 99anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 167first strand
Strand 2
A
172 178anti-parallel
Strand 3
A
188 198anti-parallel
Strand 4
A
243 249anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
283 293parallel
Strand 3
A
266 278anti-parallel
Strand 4
A
202 217anti-parallel
Strand 5
A
220 232anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
283 293parallel
Strand 3
A
266 278anti-parallel
Strand 4
A
259 262anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 16first strand
Strand 2
B
46 54anti-parallel
Strand 3
B
103 109anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
34 40anti-parallel
Strand 3
B
141 149parallel
Strand 4
B
124 134anti-parallel
Strand 5
B
66 76anti-parallel
Strand 6
B
84 94anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
34 40anti-parallel
Strand 3
B
141 149parallel
Strand 4
B
124 134anti-parallel
Strand 5
B
119 120anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
97 99anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 168first strand
Strand 2
B
172 178anti-parallel
Strand 3
B
188 198anti-parallel
Strand 4
B
243 249anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 184first strand
Strand 2
B
283 293parallel
Strand 3
B
266 278anti-parallel
Strand 4
B
202 215anti-parallel
Strand 5
B
222 232anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 184first strand
Strand 2
B
283 293parallel
Strand 3
B
266 278anti-parallel
Strand 4
B
259 262anti-parallel
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