Analysis of interatomic Contacts of Structural Units in PDB entry:
3LRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LRL entry

There is 1 chain in PDB entry 3LRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 19SER 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3LRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 41Right-handed alpha
Helix 2
2
A
45 59Right-handed alpha
Helix 3
3
A
61 65Right-handed 310
Helix 4
4
A
95 106Right-handed alpha
Helix 5
5
A
130 141Right-handed alpha
Helix 6
6
A
159 177Right-handed alpha
Helix 7
7
A
192 197Right-handed alpha
Helix 8
8
A
198 200Right-handed 310
Helix 9
9
A
238 247Right-handed alpha
Helix 10
10
A
248 253Right-handed 310
Helix 11
11
A
272 286Right-handed alpha
Helix 12
12
A
301 307Right-handed alpha
Helix 13
13
A
309 317Right-handed alpha
Helix 14
14
A
372 377Right-handed alpha
Helix 15
15
A
384 389Right-handed alpha
Helix 16
16
A
402 411Right-handed alpha
Helix 17
17
A
427 434Right-handed alpha
Helix 18
18
A
436 441Right-handed alpha
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There are 4 sheets in PDB entry 3LRL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
203 205parallel
Strand 3
A
182 185parallel
Strand 4
A
145 149parallel
Strand 5
A
109 115parallel
Strand 6
A
68 70parallel
Strand 7
A
32 35parallel
Strand 8
A
290 292parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
85 87anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 331first strand
Strand 2
A
342 349anti-parallel
Strand 3
A
355 361anti-parallel
Strand 4
A
461 469anti-parallel
Strand 5
A
391 395anti-parallel
Strand 6
A
442 447anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 371first strand
Strand 2
A
453 457anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il