Analysis of interatomic Contacts of Structural Units in PDB entry:
3LZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LZB entry

There are 8 chains in PDB entry 3LZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 679GLY 959
B
LEU 679GLY 959
C
LEU 680GLY 959
D
LEU 679GLY 959
E
UNK 7UNK 15
F
UNK 8UNK 14
G
UNK 6UNK 12
H
UNK 5UNK 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 3LZB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
731 743Right-handed alpha
Helix 2
2
A
773 781Right-handed alpha
Helix 3
3
A
786 807Right-handed alpha
Helix 4
4
A
815 817Right-handed 310
Helix 5
5
A
853 857Right-handed 310
Helix 6
6
A
858 865Right-handed alpha
Helix 7
7
A
868 885Right-handed alpha
Helix 8
8
A
895 897Right-handed 310
Helix 9
9
A
898 905Right-handed alpha
Helix 10
10
A
916 927Right-handed alpha
Helix 11
11
A
930 934Right-handed 310
Helix 12
12
A
936 949Right-handed alpha
Helix 13
13
A
950 955Right-handed alpha
Helix 14
14
B
731 743Right-handed alpha
Helix 15
15
B
773 781Right-handed alpha
Helix 16
16
B
786 807Right-handed alpha
Helix 17
17
B
815 817Right-handed 310
Helix 18
18
B
858 865Right-handed alpha
Helix 19
19
B
868 885Right-handed alpha
Helix 20
20
B
895 897Right-handed 310
Helix 21
21
B
898 905Right-handed alpha
Helix 22
22
B
916 927Right-handed alpha
Helix 23
23
B
930 934Right-handed 310
Helix 24
24
B
936 949Right-handed alpha
Helix 25
25
B
950 955Right-handed alpha
Helix 26
26
C
731 744Right-handed alpha
Helix 27
27
C
773 781Right-handed alpha
Helix 28
28
C
786 807Right-handed alpha
Helix 29
29
C
815 817Right-handed 310
Helix 30
30
C
858 865Right-handed alpha
Helix 31
31
C
868 885Right-handed alpha
Helix 32
32
C
895 897Right-handed 310
Helix 33
33
C
898 905Right-handed alpha
Helix 34
34
C
916 927Right-handed alpha
Helix 35
35
C
930 934Right-handed 310
Helix 36
36
C
936 949Right-handed alpha
Helix 37
37
C
950 955Right-handed alpha
Helix 38
38
D
731 743Right-handed alpha
Helix 39
39
D
773 781Right-handed alpha
Helix 40
40
D
786 807Right-handed alpha
Helix 41
41
D
815 817Right-handed 310
Helix 42
42
D
858 865Right-handed alpha
Helix 43
43
D
868 885Right-handed alpha
Helix 44
44
D
895 897Right-handed 310
Helix 45
45
D
898 905Right-handed alpha
Helix 46
46
D
916 927Right-handed alpha
Helix 47
47
D
930 934Right-handed 310
Helix 48
48
D
936 949Right-handed alpha
Helix 49
49
D
950 954Right-handed 310
Helix 50
50
E
7 15Right-handed alpha
Helix 51
51
H
5 13Right-handed alpha
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There are 8 sheets in PDB entry 3LZB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
681 682first strand
Strand 2
A
755 758parallel
Strand 3
A
762 766anti-parallel
Strand 4
A
716 723anti-parallel
Strand 5
A
700 707anti-parallel
Strand 6
A
688 696anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
819 823first strand
Strand 2
A
826 829anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
681 682first strand
Strand 2
B
755 758parallel
Strand 3
B
762 766anti-parallel
Strand 4
B
716 723anti-parallel
Strand 5
B
700 707anti-parallel
Strand 6
B
688 696anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
819 823first strand
Strand 2
B
826 829anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
681 682first strand
Strand 2
C
755 758parallel
Strand 3
C
762 766anti-parallel
Strand 4
C
716 723anti-parallel
Strand 5
C
700 707anti-parallel
Strand 6
C
688 696anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
819 823first strand
Strand 2
C
826 829anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
681 682first strand
Strand 2
D
755 758parallel
Strand 3
D
762 766anti-parallel
Strand 4
D
716 723anti-parallel
Strand 5
D
700 707anti-parallel
Strand 6
D
688 696anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
819 823first strand
Strand 2
D
826 829anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il