Analysis of interatomic Contacts of Structural Units in PDB entry:
3M3P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M3P entry

There is 1 chain in PDB entry 3M3P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 3M3P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 27Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
45 49Right-handed 310
Helix 4
4
A
67 82Right-handed alpha
Helix 5
5
A
89 99Right-handed alpha
Helix 6
6
A
121 129Right-handed alpha
Helix 7
7
A
180 191Right-handed alpha
Helix 8
8
A
192 195Right-handed 310
Helix 9
9
A
210 216Right-handed alpha
Helix 10
10
A
217 238Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3M3P.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
6 10parallel
Strand 3
A
51 54parallel
Strand 4
A
85 88parallel
Strand 5
A
170 173parallel
Strand 6
A
159 166anti-parallel
Strand 7
A
150 156anti-parallel
Strand 8
A
103 118anti-parallel
Strand 9
A
134 144anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il