Analysis of interatomic Contacts of Structural Units in PDB entry:
3MBK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MBK entry

There are 2 chains in PDB entry 3MBK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 373LEU 636
B
 ARG 373LEU 636
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3MBK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
383 389Right-handed alpha
Helix 2
2
A
391 396Right-handed 310
Helix 3
3
A
420 425Right-handed 310
Helix 4
4
A
431 448Right-handed alpha
Helix 5
5
A
460 474Right-handed alpha
Helix 6
6
A
486 489Right-handed 310
Helix 7
7
A
491 495Right-handed 310
Helix 8
8
A
505 512Right-handed alpha
Helix 9
9
A
525 529Right-handed 310
Helix 10
10
A
534 554Right-handed alpha
Helix 11
11
A
567 572Right-handed alpha
Helix 12
12
A
574 578Right-handed 310
Helix 13
13
A
583 592Right-handed alpha
Helix 14
14
A
630 636Right-handed alpha
Helix 15
15
B
383 389Right-handed alpha
Helix 16
16
B
391 396Right-handed 310
Helix 17
17
B
420 425Right-handed 310
Helix 18
18
B
431 448Right-handed alpha
Helix 19
19
B
460 474Right-handed alpha
Helix 20
20
B
486 489Right-handed 310
Helix 21
21
B
491 495Right-handed 310
Helix 22
22
B
505 512Right-handed alpha
Helix 23
23
B
525 529Right-handed 310
Helix 24
24
B
534 554Right-handed alpha
Helix 25
25
B
567 572Right-handed alpha
Helix 26
26
B
574 578Right-handed 310
Helix 27
27
B
583 592Right-handed alpha
Helix 28
28
B
630 636Right-handed alpha
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There are 2 sheets in PDB entry 3MBK. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 484first strand
Strand 2
A
454 457parallel
Strand 3
A
559 564parallel
Strand 4
A
374 379parallel
Strand 5
A
599 604anti-parallel
Strand 6
A
611 614anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
483 484first strand
Strand 2
B
454 457parallel
Strand 3
B
559 564parallel
Strand 4
B
374 379parallel
Strand 5
B
599 604anti-parallel
Strand 6
B
611 614anti-parallel
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