Analysis of interatomic Contacts of Structural Units in PDB entry:
3MCO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MCO entry

There are 2 chains in PDB entry 3MCO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 422
B
 HIS 0ILE 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 3MCO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 29Right-handed alpha
Helix 2
2
A
52 56Right-handed 310
Helix 3
3
A
71 87Right-handed alpha
Helix 4
4
A
123 126Right-handed 310
Helix 5
5
A
127 138Right-handed alpha
Helix 6
6
A
150 158Right-handed alpha
Helix 7
7
A
180 184Right-handed 310
Helix 8
8
A
192 204Right-handed alpha
Helix 9
9
A
224 243Right-handed alpha
Helix 10
10
A
244 246Right-handed 310
Helix 11
11
A
258 270Right-handed alpha
Helix 12
12
A
271 273Right-handed 310
Helix 13
13
A
283 295Right-handed alpha
Helix 14
14
A
322 336Right-handed alpha
Helix 15
15
A
339 341Right-handed 310
Helix 16
16
A
356 363Right-handed alpha
Helix 17
17
A
364 373Right-handed alpha
Helix 18
18
A
383 388Right-handed alpha
Helix 19
19
A
394 412Right-handed alpha
Helix 20
20
B
14 28Right-handed alpha
Helix 21
21
B
71 86Right-handed alpha
Helix 22
22
B
123 126Right-handed 310
Helix 23
23
B
127 138Right-handed alpha
Helix 24
24
B
150 159Right-handed alpha
Helix 25
25
B
192 204Right-handed alpha
Helix 26
26
B
224 243Right-handed alpha
Helix 27
27
B
244 246Right-handed 310
Helix 28
28
B
258 270Right-handed alpha
Helix 29
29
B
283 295Right-handed alpha
Helix 30
30
B
317 335Right-handed alpha
Helix 31
31
B
339 341Right-handed 310
Helix 32
32
B
354 364Right-handed alpha
Helix 33
33
B
364 373Right-handed alpha
Helix 34
34
B
383 388Right-handed 310
Helix 35
35
B
395 412Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3MCO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
59 68anti-parallel
Strand 3
A
2 10anti-parallel
Strand 4
A
101 106anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
59 68anti-parallel
Strand 3
A
41 43anti-parallel
Strand 4
A
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
118 119anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 178first strand
Strand 2
A
208 212parallel
Strand 3
A
251 255parallel
Strand 4
A
275 278parallel
Strand 5
A
297 301parallel
Strand 6
A
343 346parallel
Strand 7
A
375 378parallel
Strand 8
A
416 419parallel
Strand 9
A
172 178parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
59 68anti-parallel
Strand 3
B
2 10anti-parallel
Strand 4
B
101 106anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
59 68anti-parallel
Strand 3
B
41 43anti-parallel
Strand 4
B
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 113first strand
Strand 2
B
118 119anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 178first strand
Strand 2
B
208 212parallel
Strand 3
B
251 255parallel
Strand 4
B
273 278parallel
Strand 5
B
297 301parallel
Strand 6
B
343 346parallel
Strand 7
B
375 378parallel
Strand 8
B
416 419parallel
Strand 9
B
172 178parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il