Analysis of interatomic Contacts of Structural Units in PDB entry:
3MEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MEW entry

There is 1 chain in PDB entry 3MEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 129CYS 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 3MEW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
223 227Right-handed 310
Helix 2
2
A
280 282Right-handed 310
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There are 2 sheets in PDB entry 3MEW. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
199 206first strand
Strand 2
A
189 196anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
260 264anti-parallel
Strand 6
A
277 279anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
210 212first strand
Strand 2
A
161 167anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
233 237anti-parallel
Strand 6
A
284 285anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il