Analysis of interatomic Contacts of Structural Units in PDB entry:
3MJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MJ2 entry

There is 1 chain in PDB entry 3MJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 357ILE 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3MJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
359 361Right-handed 310
Helix 2
2
A
399 413Right-handed alpha
Helix 3
3
A
442 450Right-handed alpha
Helix 4
4
A
455 476Right-handed alpha
Helix 5
5
A
484 486Right-handed 310
Helix 6
6
A
492 494Right-handed 310
Helix 7
7
A
502 506Right-handed 310
Helix 8
8
A
509 514Right-handed alpha
Helix 9
9
A
521 525Right-handed 310
Helix 10
10
A
526 533Right-handed alpha
Helix 11
11
A
536 553Right-handed alpha
Helix 12
12
A
558 562Right-handed 310
Helix 13
13
A
563 574Right-handed alpha
Helix 14
14
A
584 595Right-handed alpha
Helix 15
15
A
598 602Right-handed 310
Helix 16
16
A
604 615Right-handed alpha
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There are 2 sheets in PDB entry 3MJ2. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 372first strand
Strand 2
A
375 382anti-parallel
Strand 3
A
386 392anti-parallel
Strand 4
A
432 436anti-parallel
Strand 5
A
421 425anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 490first strand
Strand 2
A
496 498anti-parallel
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