Analysis of interatomic Contacts of Structural Units in PDB entry:
3MNM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MNM entry

There are 12 chains in PDB entry 3MNM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 471ILE 497
A
SER 499LEU 524
A
LEU 526LEU 559
A
VAL 561VAL 585
B
ALA 471ILE 497
B
SER 499LEU 524
B
LEU 526LEU 559
B
VAL 561VAL 585
C
PRO 470ILE 497
C
SER 499LEU 524
C
LEU 526LEU 559
C
VAL 561VAL 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3MNM


There are 5 sheets in PDB entry 3MNM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
472 477first strand
Strand 2
A
481 489anti-parallel
Strand 3
A
495 503anti-parallel
Strand 4
A
542 549anti-parallel
Strand 5
A
523 526anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
509 517first strand
Strand 2
A
560 569anti-parallel
Strand 3
A
572 581anti-parallel
Strand 4
B
572 581anti-parallel
Strand 5
B
560 569anti-parallel
Strand 6
B
510 517anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
473 477first strand
Strand 2
B
481 491anti-parallel
Strand 3
B
494 503anti-parallel
Strand 4
B
542 549anti-parallel
Strand 5
B
523 526anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
472 477first strand
Strand 2
C
481 489anti-parallel
Strand 3
C
495 503anti-parallel
Strand 4
C
542 549anti-parallel
Strand 5
C
523 526anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
509 517first strand
Strand 2
C
559 569anti-parallel
Strand 3
C
572 582anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il