Analysis of interatomic Contacts of Structural Units in PDB entry:
3MTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MTL entry

There is 1 chain in PDB entry 3MTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 162GLU 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3MTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
211 216Right-handed alpha
Helix 2
2
A
247 254Right-handed alpha
Helix 3
3
A
259 280Right-handed alpha
Helix 4
4
A
288 290Right-handed 310
Helix 5
5
A
324 328Right-handed 310
Helix 6
6
A
329 334Right-handed alpha
Helix 7
7
A
341 358Right-handed alpha
Helix 8
8
A
366 379Right-handed alpha
Helix 9
9
A
388 391Right-handed 310
Helix 10
10
A
392 398Right-handed alpha
Helix 11
11
A
407 412Right-handed alpha
Helix 12
12
A
416 427Right-handed alpha
Helix 13
13
A
430 434Right-handed 310
Helix 14
14
A
436 441Right-handed alpha
Helix 15
15
A
442 450Right-handed 310
Helix 16
16
A
461 465Right-handed 310
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There are 3 sheets in PDB entry 3MTL. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 173first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
190 196anti-parallel
Strand 4
A
236 241anti-parallel
Strand 5
A
226 231anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
292 294anti-parallel
Strand 3
A
300 302anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 284first strand
Strand 2
A
307 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il