Analysis of interatomic Contacts of Structural Units in PDB entry:
3MWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MWC entry

There is 1 chain in PDB entry 3MWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2GLN 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3MWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 75Right-handed alpha
Helix 2
2
A
75 81Right-handed alpha
Helix 3
3
A
87 98Right-handed alpha
Helix 4
4
A
102 121Right-handed alpha
Helix 5
5
A
124 136Right-handed alpha
Helix 6
6
A
139 144Right-handed 310
Helix 7
7
A
162 177Right-handed alpha
Helix 8
8
A
190 202Right-handed alpha
Helix 9
9
A
216 218Right-handed 310
Helix 10
10
A
219 227Right-handed alpha
Helix 11
11
A
228 230Right-handed 310
Helix 12
12
A
242 253Right-handed alpha
Helix 13
13
A
265 275Right-handed alpha
Helix 14
14
A
284 289Right-handed alpha
Helix 15
15
A
290 304Right-handed alpha
Helix 16
16
A
316 327Right-handed alpha
Helix 17
17
A
340 346Right-handed alpha
Helix 18
18
A
374 381Right-handed alpha
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There are 3 sheets in PDB entry 3MWC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
33 43anti-parallel
Strand 3
A
10 19anti-parallel
Strand 4
A
382 388anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
360 362anti-parallel
Strand 3
A
356 357anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
A
181 184parallel
Strand 3
A
207 210parallel
Strand 4
A
234 235parallel
Strand 5
A
257 259parallel
Strand 6
A
280 283parallel
Strand 7
A
307 310parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il