Analysis of interatomic Contacts of Structural Units in PDB entry:
3MX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MX0 entry

There are 4 chains in PDB entry 3MX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 27ASN 435
B
VAL 28MET 165
C
LYS 27ASN 435
D
VAL 28MET 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3MX0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
153 158Right-handed alpha
Helix 2
2
B
83 89Right-handed alpha
Helix 3
3
C
33 37Right-handed 310
Helix 4
4
C
152 157Right-handed alpha
Helix 5
5
D
83 89Right-handed alpha
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There are 28 sheets in PDB entry 3MX0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 33first strand
Strand 2
A
195 201anti-parallel
Strand 3
A
94 96anti-parallel
Strand 4
A
168 170anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 33first strand
Strand 2
A
195 201anti-parallel
Strand 3
A
214 215anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 45first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
182 184anti-parallel
Strand 4
A
120 126anti-parallel
Strand 5
A
177 179anti-parallel
Strand 6
A
86 87anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 45first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
182 184anti-parallel
Strand 4
A
120 126anti-parallel
Strand 5
A
140 141anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 55first strand
Strand 2
A
66 68anti-parallel
Strand 3
A
190 193anti-parallel
Strand 4
A
99 103anti-parallel
Strand 5
A
150 151parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 55first strand
Strand 2
A
66 68anti-parallel
Strand 3
A
190 193anti-parallel
Strand 4
A
99 103anti-parallel
Strand 5
A
163 165anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 59first strand
Strand 2
A
62 63anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
204 205first strand
Strand 2
A
209 211anti-parallel
Strand 3
A
229 230anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
224 227first strand
Strand 2
A
244 247anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
266 267first strand
Strand 2
A
274 275anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
280 281first strand
Strand 2
A
291 292anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
335 338first strand
Strand 2
A
344 348anti-parallel
Strand 3
A
396 399anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
361 366first strand
Strand 2
A
408 415anti-parallel
Strand 3
A
427 432anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
31 35first strand
Strand 2
B
57 61parallel
Strand 3
B
113 117anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
49 52first strand
Strand 2
B
153 158parallel
Strand 3
B
135 140anti-parallel
Strand 4
B
79 82anti-parallel
Strand 5
B
97 98anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
29 30first strand
Strand 2
C
196 198anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
164 170anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
44 46first strand
Strand 2
C
80 82anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
53 59first strand
Strand 2
C
62 70anti-parallel
Strand 3
C
188 191anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
86 87first strand
Strand 2
C
177 181anti-parallel
Strand 3
C
119 126anti-parallel
Strand 4
C
140 145anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
204 205first strand
Strand 2
C
209 211anti-parallel
Strand 3
C
229 230anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
224 227first strand
Strand 2
C
244 247anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
266 269first strand
Strand 2
C
272 275anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
280 281first strand
Strand 2
C
291 292anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
297 298first strand
Strand 2
C
308 309anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
337 338first strand
Strand 2
C
344 346anti-parallel
Strand 3
C
397 400anti-parallel
Strand 4
C
384 385anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
362 366first strand
Strand 2
C
408 414anti-parallel
Strand 3
C
427 432anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 33first strand
Strand 2
D
57 59parallel
Strand 3
D
116 117anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
49 52first strand
Strand 2
D
153 158parallel
Strand 3
D
135 140anti-parallel
Strand 4
D
79 82anti-parallel
Strand 5
D
96 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il