Analysis of interatomic Contacts of Structural Units in PDB entry:
3N0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N0Y entry

There are 2 chains in PDB entry 3N0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 4PHE 179
B
HIS 4PHE 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 3N0Y. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
53 57Right-handed 310
Helix 3
3
A
90 101Right-handed alpha
Helix 4
4
A
143 145Right-handed 310
Helix 5
5
A
146 162Right-handed alpha
Helix 6
6
A
164 168Right-handed 310
Helix 7
7
A
172 178Right-handed alpha
Helix 8
8
B
19 30Right-handed alpha
Helix 9
9
B
53 57Right-handed 310
Helix 10
10
B
90 101Right-handed alpha
Helix 11
11
B
143 145Right-handed 310
Helix 12
12
B
146 160Right-handed alpha
Helix 13
13
B
164 168Right-handed 310
Helix 14
14
B
172 177Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3N0Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
9 16first strand
Strand 2
A
132 141anti-parallel
Strand 3
A
121 128anti-parallel
Strand 4
A
104 118anti-parallel
Strand 5
A
33 47anti-parallel
Strand 6
A
59 66anti-parallel
Strand 7
A
71 76anti-parallel
Strand 8
A
83 87anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
9 16first strand
Strand 2
B
132 141anti-parallel
Strand 3
B
121 128anti-parallel
Strand 4
B
103 118anti-parallel
Strand 5
B
33 48anti-parallel
Strand 6
B
59 66anti-parallel
Strand 7
B
71 76anti-parallel
Strand 8
B
83 87anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il