Analysis of interatomic Contacts of Structural Units in PDB entry:
3N6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N6V entry

There are 6 chains in PDB entry 3N6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6LEU 378
B
 ILE 6THR 377
C
 ILE 6LEU 378
D
 ILE 6THR 377
E
 ILE 6THR 377
F
 ILE 6THR 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3N6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 31Right-handed alpha
Helix 2
2
A
48 63Right-handed alpha
Helix 3
3
A
75 87Right-handed alpha
Helix 4
4
A
110 122Right-handed alpha
Helix 5
5
A
137 150Right-handed alpha
Helix 6
6
A
166 173Right-handed alpha
Helix 7
7
A
191 206Right-handed alpha
Helix 8
8
A
226 230Right-handed 310
Helix 9
9
A
246 257Right-handed alpha
Helix 10
10
A
273 292Right-handed alpha
Helix 11
11
A
319 329Right-handed alpha
Helix 12
12
B
16 31Right-handed alpha
Helix 13
13
B
48 63Right-handed alpha
Helix 14
14
B
75 87Right-handed alpha
Helix 15
15
B
110 122Right-handed alpha
Helix 16
16
B
137 150Right-handed alpha
Helix 17
17
B
166 173Right-handed alpha
Helix 18
18
B
191 206Right-handed alpha
Helix 19
19
B
220 224Right-handed 310
Helix 20
20
B
226 230Right-handed 310
Helix 21
21
B
246 257Right-handed alpha
Helix 22
22
B
273 292Right-handed alpha
Helix 23
23
B
319 329Right-handed alpha
Helix 24
24
C
16 31Right-handed alpha
Helix 25
25
C
48 63Right-handed alpha
Helix 26
26
C
75 87Right-handed alpha
Helix 27
27
C
110 122Right-handed alpha
Helix 28
28
C
137 150Right-handed alpha
Helix 29
29
C
166 180Right-handed alpha
Helix 30
30
C
191 206Right-handed alpha
Helix 31
31
C
220 224Right-handed 310
Helix 32
32
C
226 230Right-handed 310
Helix 33
33
C
246 257Right-handed alpha
Helix 34
34
C
273 295Right-handed alpha
Helix 35
35
C
319 329Right-handed alpha
Helix 36
36
D
16 31Right-handed alpha
Helix 37
37
D
48 63Right-handed alpha
Helix 38
38
D
75 87Right-handed alpha
Helix 39
39
D
110 122Right-handed alpha
Helix 40
40
D
133 136Right-handed 310
Helix 41
41
D
137 150Right-handed alpha
Helix 42
42
D
166 173Right-handed alpha
Helix 43
43
D
191 205Right-handed alpha
Helix 44
44
D
226 230Right-handed 310
Helix 45
45
D
246 257Right-handed alpha
Helix 46
46
D
273 292Right-handed alpha
Helix 47
47
D
319 329Right-handed alpha
Helix 48
48
E
16 31Right-handed alpha
Helix 49
49
E
48 63Right-handed alpha
Helix 50
50
E
75 87Right-handed alpha
Helix 51
51
E
110 122Right-handed alpha
Helix 52
52
E
137 150Right-handed alpha
Helix 53
53
E
166 173Right-handed alpha
Helix 54
54
E
191 205Right-handed alpha
Helix 55
55
E
226 230Right-handed 310
Helix 56
56
E
246 257Right-handed alpha
Helix 57
57
E
273 295Right-handed alpha
Helix 58
58
E
319 329Right-handed alpha
Helix 59
59
F
16 31Right-handed alpha
Helix 60
60
F
48 63Right-handed alpha
Helix 61
61
F
75 87Right-handed alpha
Helix 62
62
F
110 122Right-handed alpha
Helix 63
63
F
133 136Right-handed 310
Helix 64
64
F
137 144Right-handed alpha
Helix 65
65
F
145 150Right-handed alpha
Helix 66
66
F
166 173Right-handed alpha
Helix 67
67
F
191 206Right-handed alpha
Helix 68
68
F
226 230Right-handed 310
Helix 69
69
F
246 257Right-handed alpha
Helix 70
70
F
273 292Right-handed alpha
Helix 71
71
F
319 329Right-handed alpha
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There are 18 sheets in PDB entry 3N6V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 44first strand
Strand 2
A
7 13parallel
Strand 3
A
66 69parallel
Strand 4
A
89 92parallel
Strand 5
A
104 106parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 158first strand
Strand 2
A
126 131parallel
Strand 3
A
185 189parallel
Strand 4
A
213 216parallel
Strand 5
A
235 240parallel
Strand 6
A
351 357anti-parallel
Strand 7
A
362 369anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 334first strand
Strand 2
A
337 340anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 44first strand
Strand 2
B
7 13parallel
Strand 3
B
66 69parallel
Strand 4
B
89 92parallel
Strand 5
B
104 106parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 158first strand
Strand 2
B
126 131parallel
Strand 3
B
185 189parallel
Strand 4
B
213 216parallel
Strand 5
B
235 240parallel
Strand 6
B
351 357anti-parallel
Strand 7
B
362 369anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 334first strand
Strand 2
B
337 340anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 44first strand
Strand 2
C
7 13parallel
Strand 3
C
66 68parallel
Strand 4
C
89 92parallel
Strand 5
C
104 106parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
153 158first strand
Strand 2
C
126 131parallel
Strand 3
C
185 189parallel
Strand 4
C
213 216parallel
Strand 5
C
235 240parallel
Strand 6
C
351 357anti-parallel
Strand 7
C
362 369anti-parallel
Strand 8
C
375 376anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
331 334first strand
Strand 2
C
337 340anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 44first strand
Strand 2
D
7 13parallel
Strand 3
D
66 69parallel
Strand 4
D
89 92parallel
Strand 5
D
104 106parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
153 158first strand
Strand 2
D
126 131parallel
Strand 3
D
185 189parallel
Strand 4
D
213 216parallel
Strand 5
D
235 240parallel
Strand 6
D
351 357anti-parallel
Strand 7
D
362 369anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
331 334first strand
Strand 2
D
337 340anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 44first strand
Strand 2
E
7 13parallel
Strand 3
E
66 69parallel
Strand 4
E
89 92parallel
Strand 5
E
104 106parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
153 158first strand
Strand 2
E
126 131parallel
Strand 3
E
185 189parallel
Strand 4
E
213 216parallel
Strand 5
E
235 240parallel
Strand 6
E
351 357anti-parallel
Strand 7
E
362 369anti-parallel
Strand 8
E
375 376anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
331 334first strand
Strand 2
E
337 341anti-parallel
Strand 3
E
347 348anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 44first strand
Strand 2
F
7 13parallel
Strand 3
F
66 69parallel
Strand 4
F
89 92parallel
Strand 5
F
104 106parallel
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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
153 158first strand
Strand 2
F
126 131parallel
Strand 3
F
185 189parallel
Strand 4
F
213 216parallel
Strand 5
F
235 240parallel
Strand 6
F
353 357anti-parallel
Strand 7
F
362 366anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
331 334first strand
Strand 2
F
337 340anti-parallel
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